RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 ATP13A4Q4VNC1 1196 aa18.35■□□□□ 0.53
SSR4P1-202ENST00000429427 NEK5Q6P3R8 708 aa18.35■□□□□ 0.53
SSR4P1-202ENST00000429427 FAM71BQ8TC56 605 aa18.35■□□□□ 0.53
SSR4P1-202ENST00000429427 LRIG1Q96JA1 1093 aa18.35■□□□□ 0.53
SSR4P1-202ENST00000429427 KLHL32Q96NJ5 620 aa18.35■□□□□ 0.53
SSR4P1-202ENST00000429427 NCAPGQ9BPX3 1015 aa18.35■□□□□ 0.53
SSR4P1-202ENST00000429427 SLC32A1Q9H598 525 aa18.35■□□□□ 0.53
SSR4P1-202ENST00000429427 DMTF1Q9Y222 760 aa18.35■□□□□ 0.53
SSR4P1-202ENST00000429427 PCDHGB2Q9Y5G2 931 aa18.35■□□□□ 0.53
SSR4P1-202ENST00000429427 A0A1B0GTQ1 180 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 MYO1FO00160 1098 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 TLR4O00206 839 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 DFFAO00273 331 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 AREL1O15033 823 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 MUSKO15146 869 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 DAPK3O43293 454 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 AP1G1O43747 822 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 PEX11BO96011 259 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 ITIH2P19823 946 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 ZNF135P52742 658 aaPredicted RBP18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 C21orf59P57076 290 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 SIM1P81133 766 aaPredicted RBP18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 MMRN1Q13201 1228 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 SETMARQ53H47 684 aaPredicted RBP18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 FBXL19Q6PCT2 694 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 GDPD4Q6W3E5 623 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 KDM7AQ6ZMT4 941 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 MFSD2AQ8NA29 543 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 TSEN2Q8NCE0 465 aaKnown RBP18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 ELF4Q99607 663 aaPredicted RBP18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 RBSNQ9H1K0 784 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 NHEJ1Q9H9Q4 299 aaPredicted RBP18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 CTTNBP2NLQ9P2B4 639 aa18.34■□□□□ 0.53
SSR4P1-202ENST00000429427 ARHGAP42A6NI28 874 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 PRAMEF26H0Y7S4 382 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 H3BRJ5 948 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 RAD51BO15315 384 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 PCDHGA12O60330 932 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 BUB1BO60566 1050 aaPredicted RBP18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 PROSCO94903 275 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 PCDH8O95206 1070 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 PIGNO95427 931 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 IGSF6O95976 241 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 TMEM253P0C7T8 217 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 SPINK2P20155 84 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 NUDT1P36639 197 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 CCT8P50990 548 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 CLDN2P57739 230 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 SHC2P98077 582 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 GCNT7Q6ZNI0 430 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 ZSWIM9Q86XI8 627 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 GAS2L3Q86XJ1 694 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 OSBPL1AQ9BXW6 950 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 UVRAGQ9P2Y5 699 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 MAP1BP46821 2468 aaKnown RBP18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 WDFY3Q8IZQ1 3526 aa18.33■□□□□ 0.52
SSR4P1-202ENST00000429427 AKR1B10O60218 316 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 H2AFZP0C0S5 128 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 TIMP2P16035 220 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 CCDC15Q0P6D6 951 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 TRIP6Q15654 476 aaKnown RBP18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 H2AFVQ71UI9 128 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 IQCHQ86VS3 1027 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 GATAD2AQ86YP4 633 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 SLC22A18ASQ8N1D0 253 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 TC2NQ8N9U0 490 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 CTNNBL1Q8WYA6 563 aaPredicted RBP18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 KLF6Q99612 283 aaPredicted RBP18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 CPEB1Q9BZB8 566 aaKnown RBP18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 KLHL11Q9NVR0 708 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 TOR4AQ9NXH8 423 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 DONSONQ9NYP3 566 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 IPO11Q9UI26 975 aaKnown RBP18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 IGF2RP11717 2491 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 USP24Q9UPU5 2620 aa18.32■□□□□ 0.52
SSR4P1-202ENST00000429427 TSPAN11A1L157 253 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 IGLON5A6NGN9 336 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 AKR1B15C9JRZ8 316 aaPredicted RBP18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 FLRT2O43155 660 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 HNRNPA2B1P22626 353 aaKnown RBP18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 ARL4AP40617 200 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 CDH6P55285 790 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 RPS21P63220 83 aaKnown RBP18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 IL10RBQ08334 325 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 SLC10A7Q0GE19 358 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 FOXC1Q12948 553 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 DPYSL3Q14195 570 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 KIAA1161Q6NSJ0 714 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 TMCO3Q6UWJ1 677 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 KANSL1Q7Z3B3 1105 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 CNGA4Q8IV77 575 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 OR13H1Q8NG92 308 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 SAP25Q8TEE9 199 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 SETD7Q8WTS6 366 aaKnown RBP18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 CNTNAP3BQ96NU0 1288 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 C1QTNF2Q9BXJ5 285 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 SLC17A9Q9BYT1 436 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 CNTNAP3Q9BZ76 1288 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 TRIM5Q9C035 493 aa18.31■□□□□ 0.52
SSR4P1-202ENST00000429427 DEF6Q9H4E7 631 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms