RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 C11orf74Q86VG3 221 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 SLC13A5Q86YT5 568 aaPredicted RBP22.6■■□□□ 1.21
PTPN18-205ENST00000428843 TTC13Q8NBP0 860 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 PPP1R16AQ96I34 528 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 NSMCE3Q96MG7 304 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 NUDCD1Q96RS6 583 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 OSBPL1AQ9BXW6 950 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 EPC1Q9H2F5 836 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 SCUBE2Q9NQ36 999 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 DYRK4Q9NR20 520 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 AMACRQ9UHK6 382 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 FZD4Q9ULV1 537 aa22.6■■□□□ 1.21
PTPN18-205ENST00000428843 HLA-DQB2P05538 268 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 ITGB7P26010 798 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 ACSL1P33121 698 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 GNG11P61952 73 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 AP1S1P61966 158 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 NHLH1Q02575 133 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 ITKQ08881 620 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 GRM3Q14832 879 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 PLK5Q496M5 336 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 ZNF805Q5CZA5 627 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 NCEH1Q6PIU2 408 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.59■■□□□ 1.21
PTPN18-205ENST00000428843 ADAT2Q7Z6V5 191 aaKnown RBP22.59■■□□□ 1.21
PTPN18-205ENST00000428843 FAM131CQ96AQ9 280 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 KLHL32Q96NJ5 620 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 TUBGCP5Q96RT8 1024 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 CEP41Q9BYV8 373 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 POLR1EQ9GZS1 481 aaKnown RBP22.59■■□□□ 1.21
PTPN18-205ENST00000428843 BTBD1Q9H0C5 482 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 DUSP15Q9H1R2 295 aaPredicted RBP22.59■■□□□ 1.21
PTPN18-205ENST00000428843 C10orf88Q9H8K7 445 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 R3HDM2Q9Y2K5 976 aaKnown RBP22.59■■□□□ 1.21
PTPN18-205ENST00000428843 ATP8A1Q9Y2Q0 1164 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 TTLL3Q9Y4R7 772 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 SPAG17Q6Q759 2223 aa22.59■■□□□ 1.21
PTPN18-205ENST00000428843 CEP104O60308 925 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 NDUFS2O75306 463 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 RBP3P10745 1247 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 MAPK8P45983 427 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 RPL6Q02878 288 aaKnown RBP22.58■■□□□ 1.21
PTPN18-205ENST00000428843 AGBL4Q5VU57 503 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 CAMK1DQ8IU85 385 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 CNTD1Q8N815 330 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 HDAC8Q9BY41 377 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 ATP13A3Q9H7F0 1226 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 SGK2Q9HBY8 427 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 NOD2Q9HC29 1040 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 HAUS2Q9NVX0 235 aa22.58■■□□□ 1.21
PTPN18-205ENST00000428843 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 MTSS1O43312 755 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 PTPN3P26045 913 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 RBL1P28749 1068 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 DSC2Q02487 901 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 BCL2L1Q07817 233 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 LPAL2Q16609 132 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 PIP5KL1Q5T9C9 394 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 ALG1LQ6GMV1 187 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 ERN2Q76MJ5 926 aaKnown RBP22.57■■□□□ 1.2
PTPN18-205ENST00000428843 PARS2Q7L3T8 475 aaKnown RBP22.57■■□□□ 1.2
PTPN18-205ENST00000428843 CDKL3Q8IVW4 592 aaPredicted RBP22.57■■□□□ 1.2
PTPN18-205ENST00000428843 TMEFF1Q8IYR6 380 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.57■■□□□ 1.2
PTPN18-205ENST00000428843 DEFB119Q8N690 84 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 HTR3CQ8WXA8 447 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 ZC3H10Q96K80 434 aaKnown RBP22.57■■□□□ 1.2
PTPN18-205ENST00000428843 PBKQ96KB5 322 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 ZNF641Q96N77 438 aaPredicted RBP22.57■■□□□ 1.2
PTPN18-205ENST00000428843 AGAP3Q96P47 875 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 WDR24Q96S15 920 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 SEMA3CQ99985 751 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 GPR174Q9BXC1 333 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 SUV39H2Q9H5I1 410 aa22.57■■□□□ 1.2
PTPN18-205ENST00000428843 C16orf96A6NNT2 1141 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 SLC7A4O43246 635 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 SEMA4FO95754 770 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 SERPINA4P29622 427 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 NEK3P51956 506 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 ADPRHP54922 357 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 WASHC5Q12768 1159 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 ELF2Q15723 593 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 TEX44Q53QW1 395 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 RALGPS1Q5JS13 557 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 PMS2CLQ68D20 193 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 DARS2Q6PI48 645 aaKnown RBP22.56■■□□□ 1.2
PTPN18-205ENST00000428843 LPCAT2Q7L5N7 544 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 OR14C36Q8NHC7 312 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 PHOX2BQ99453 314 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 SEMA4AQ9H3S1 761 aa22.56■■□□□ 1.2
PTPN18-205ENST00000428843 SMG5Q9UPR3 1016 aaKnown RBP22.56■■□□□ 1.2
PTPN18-205ENST00000428843 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.55■■□□□ 1.2
PTPN18-205ENST00000428843 BCLAF3A2AJT9 711 aaKnown RBP22.55■■□□□ 1.2
PTPN18-205ENST00000428843 RHOBTB1O94844 696 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 FGGP02679 453 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 ADRB3P13945 408 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 NIPAL4Q0D2K0 466 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 CCDC15Q0P6D6 951 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 HS1BP3Q53T59 392 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 FBXL19Q6PCT2 694 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms