RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 GKN2Q86XP6 184 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 FAM187AA6NFU0 413 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 ERI2A8K979 691 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 GRXCR1A8MXD5 290 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 AXIN1O15169 862 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 CCNT2O60583 730 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 PER3P56645 1201 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 DGKKQ5KSL6 1271 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 SMYD5Q6GMV2 418 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 C1orf186Q6ZWK4 172 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 NAF1Q96HR8 494 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 RPL10LQ96L21 214 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 LRFN3Q9BTN0 628 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 TTLL2Q9BWV7 592 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 CARS2Q9HA77 564 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 GPAMQ9HCL2 828 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 EVLQ9UI08 416 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 FAF1Q9UNN5 650 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 CYP3A7-CYP3A51PA0A087WV96 503 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 TCRBV21S2A2A0A5A6 115 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 H0Y858 1186 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 CCNDBP1O95273 360 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 MYL2P10916 166 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 STMN1P16949 149 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 CYP3A7P24462 503 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 ADAM17P78536 824 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 ZXDAP98168 799 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 STX4Q12846 297 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 BIKQ13323 160 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 LPIN1Q14693 890 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 MAPRE2Q15555 327 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 RBM43Q6ZSC3 357 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 SYDE1Q6ZW31 735 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 KBTBD6Q86V97 674 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 HCAR2Q8TDS4 363 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 TMEM209Q96SK2 561 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 ACAT2Q9BWD1 397 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 GPR174Q9BXC1 333 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 CEP41Q9BYV8 373 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 TPSD1Q9BZJ3 242 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 GOLPH3LQ9H4A5 285 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 PDZD7Q9H5P4 517 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 SH3BP4Q9P0V3 963 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 FNIP2Q9P278 1114 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 SUCOQ9UBS9 1254 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 DMTF1Q9Y222 760 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 TMEM221A6NGB7 291 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 M0R296 226 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 CLDN4O14493 209 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 XPO1O14980 1071 aaKnown RBP7.3□□□□□ -1.24
CNOT4-206ENST00000428680 C22orf31O95567 290 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 TNFP01375 233 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 GALTP07902 379 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 ESRRAP11474 423 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-206ENST00000428680 GZMAP12544 262 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 TACR2P21452 398 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 CNR2P34972 360 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 SLC16A1P53985 500 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 SKOR1P84550 965 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 GTF2BQ00403 316 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 IRF8Q02556 426 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 SLC9A5Q14940 896 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 E2F4Q16254 413 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 GSTA3Q16772 222 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 CHST15Q7LFX5 561 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-206ENST00000428680 STX19Q8N4C7 294 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 RBM15Q96T37 977 aaKnown RBP eCLIP7.3□□□□□ -1.241e-6■■■□□ 18.6
CNOT4-206ENST00000428680 KLQ9UEF7 1012 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 CAPN11Q9UMQ6 739 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 E2F8A0AVK6 867 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 HEPACAM2A8MVW5 462 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 LOC730098B7Z3J9 87 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 MSI1O43347 362 aaKnown RBP7.3□□□□□ -1.24
CNOT4-206ENST00000428680 NBNO60934 754 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 LRP3O75074 770 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 ZNF217O75362 1048 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 LYPLA2O95372 231 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 KITP10721 976 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 PIM1P11309 404 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-206ENST00000428680 ARHGAP25P42331 645 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 SPIRE1Q08AE8 756 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 MED21Q13503 144 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 DLG2Q15700 870 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 CTC1Q2NKJ3 1217 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 ZNF528Q3MIS6 628 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 CERCAMQ5T4B2 595 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 MBLAC2Q68D91 279 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 LIX1Q8N485 282 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 USP7Q93009 1102 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 PLD4Q96BZ4 506 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 GSDMCQ9BYG8 508 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 KCNMB3Q9NPA1 279 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 VAV3Q9UKW4 847 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 SIT1Q9Y3P8 196 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 MAFBQ9Y5Q3 323 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-206ENST00000428680 BRWD1Q9NSI6 2320 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 H3BNH8 94 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 DGKAP23743 735 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 PON1P27169 355 aa7.3□□□□□ -1.24
CNOT4-206ENST00000428680 PCK1P35558 622 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms