RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 BNIP3Q12983 259 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 ATXN7L2Q5T6C5 722 aaPredicted RBP15.38■□□□□ 0.05
PHF1-204ENST00000427826 TMPRSS7Q7RTY8 843 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 ABI3BPQ7Z7G0 1075 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 TTC7BQ86TV6 843 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 EID2Q8N6I1 236 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 ARFGAP1Q8N6T3 406 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 HCAR2Q8TDS4 363 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 ASB12Q8WXK4 309 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 IFT43Q96FT9 208 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 CNDP2Q96KP4 475 aaKnown RBP15.38■□□□□ 0.05
PHF1-204ENST00000427826 KLHL32Q96NJ5 620 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 LENG8Q96PV6 779 aaPredicted RBP15.38■□□□□ 0.05
PHF1-204ENST00000427826 MYOCQ99972 504 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 SNRNP25Q9BV90 132 aaKnown RBP15.38■□□□□ 0.05
PHF1-204ENST00000427826 CPEB1Q9BZB8 566 aaKnown RBP15.38■□□□□ 0.05
PHF1-204ENST00000427826 LRRC19Q9H756 370 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 FZD3Q9NPG1 666 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 GPATCH2LQ9NWQ4 482 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 MYO1AQ9UBC5 1043 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 DKK3Q9UBP4 350 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 UBA2Q9UBT2 640 aaPredicted RBP15.38■□□□□ 0.05
PHF1-204ENST00000427826 CA5BQ9Y2D0 317 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 PCDHGA1Q9Y5H4 931 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 ASPMQ8IZT6 3477 aa15.38■□□□□ 0.05
PHF1-204ENST00000427826 FPGTO14772 594 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 LRCH4O75427 683 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 ZSCAN23Q3MJ62 389 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 BOLA3Q53S33 107 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 HS1BP3Q53T59 392 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 PPP6R3Q5H9R7 873 aaPredicted RBP15.37■□□□□ 0.05
PHF1-204ENST00000427826 HGSNATQ68CP4 663 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 RFX8Q6ZV50 586 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 DNAAF5Q86Y56 855 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 LZTR1Q8N653 840 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 C1QTNF2Q9BXJ5 285 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 CALN1Q9BXU9 219 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 TRIM7Q9C029 511 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 KLC2Q9H0B6 622 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 ZWILCHQ9H900 591 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 ZMIZ1Q9ULJ6 1067 aa15.37■□□□□ 0.05
PHF1-204ENST00000427826 KMT2BQ9UMN6 2715 aaPredicted RBP15.37■□□□□ 0.05
PHF1-204ENST00000427826 IGLON5A6NGN9 336 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 PRAMEF11O60813 436 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 ERCC2P18074 760 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 RABIFP47224 123 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 PAPOLAP51003 745 aaKnown RBP15.36■□□□□ 0.05
PHF1-204ENST00000427826 CLDN2P57739 230 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 PIGHQ14442 188 aaPredicted RBP15.36■□□□□ 0.05
PHF1-204ENST00000427826 CYTH1Q15438 398 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 CA9Q16790 459 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 KYAT3Q6YP21 454 aaKnown RBP15.36■□□□□ 0.05
PHF1-204ENST00000427826 GCNT7Q6ZNI0 430 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 Q6ZSR6 202 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 KANSL1Q7Z3B3 1105 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 PTAR1Q7Z6K3 402 aaPredicted RBP15.36■□□□□ 0.05
PHF1-204ENST00000427826 DENND6BQ8NEG7 585 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 OR13H1Q8NG92 308 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 CPLX3Q8WVH0 158 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 ZCCHC14Q8WYQ9 949 aaKnown RBP15.36■□□□□ 0.05
PHF1-204ENST00000427826 PEBP4Q96S96 227 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 KCTD15Q96SI1 283 aaPredicted RBP15.36■□□□□ 0.05
PHF1-204ENST00000427826 C1QTNF7Q9BXJ2 289 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 PDFQ9HBH1 243 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 IFNKQ9P0W0 207 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.36■□□□□ 0.051e-9■□□□□ 9.3
PHF1-204ENST00000427826 FRYQ5TBA9 3013 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 CHD5Q8TDI0 1954 aa15.36■□□□□ 0.05
PHF1-204ENST00000427826 TMEM131Q92545 1883 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 J3KR12 359 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 AREL1O15033 823 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 CKMT2P17540 419 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 XPAP23025 273 aaPredicted RBP15.35■□□□□ 0.05
PHF1-204ENST00000427826 ARL4AP40617 200 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 ABL2P42684 1182 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 CSNK1DP48730 415 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 ELP6Q0PNE2 266 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 ZNF211Q13398 564 aaPredicted RBP15.35■□□□□ 0.05
PHF1-204ENST00000427826 ILKQ13418 452 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 FGL2Q14314 439 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 RFTN1Q14699 578 aaPredicted RBP15.35■□□□□ 0.05
PHF1-204ENST00000427826 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 SMAD1Q15797 465 aaKnown RBP15.35■□□□□ 0.05
PHF1-204ENST00000427826 CCDC157Q569K6 752 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 AFMIDQ63HM1 303 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 CXorf40AQ8TE69 158 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 VOPP1Q96AW1 172 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 CELF6Q96J87 481 aaKnown RBP15.35■□□□□ 0.05
PHF1-204ENST00000427826 BMFQ96LC9 184 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 ZNF641Q96N77 438 aaPredicted RBP15.35■□□□□ 0.05
PHF1-204ENST00000427826 TUBGCP5Q96RT8 1024 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 SLC39A8Q9C0K1 460 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 LHX3Q9UBR4 397 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 IP6K2Q9UHH9 426 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 IPO11Q9UI26 975 aaKnown RBP15.35■□□□□ 0.05
PHF1-204ENST00000427826 USP24Q9UPU5 2620 aa15.35■□□□□ 0.05
PHF1-204ENST00000427826 NEMP2A6NFY4 417 aa15.34■□□□□ 0.05
PHF1-204ENST00000427826 H3BRJ5 948 aa15.34■□□□□ 0.05
PHF1-204ENST00000427826 RFPL3O75679 317 aa15.34■□□□□ 0.05
PHF1-204ENST00000427826 PALMO75781 387 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms