RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 IGSF6O95976 241 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 WNT1P04628 370 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CYP1A2P05177 515 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 UGT2B4P06133 528 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ADRB3P13945 408 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ERCC2P18074 760 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CD38P28907 300 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PMLP29590 882 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 HNRNPH3P31942 346 aaKnown RBP9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CTSKP43235 329 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 FAM193AP78312 1265 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SIM1P81133 766 aaPredicted RBP9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SLC14A1Q13336 389 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SERINC3Q13530 473 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PIGHQ14442 188 aaPredicted RBP9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SETMARQ53H47 684 aaPredicted RBP9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SLC45A4Q5BKX6 768 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 LRRC73Q5JTD7 316 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SEL1L3Q68CR1 1132 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 TXNRD3NBQ6F5E7 133 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 FBXL19Q6PCT2 694 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 HORMAD1Q86X24 394 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PSTKQ8IV42 348 aaKnown RBP9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 OR8K1Q8NGG5 319 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ZNF564Q8TBZ8 553 aaPredicted RBP9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 KLK6Q92876 244 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SKA1Q96BD8 255 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 NCAPGQ9BPX3 1015 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PACSIN1Q9BY11 444 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 HDAC8Q9BY41 377 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 LRRC19Q9H756 370 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SP110Q9HB58 689 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PDFQ9HBH1 243 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 FZD3Q9NPG1 666 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ZNHIT6Q9NWK9 470 aaKnown RBP9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 TOR4AQ9NXH8 423 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CTTNBP2NLQ9P2B4 639 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 IP6K2Q9UHH9 426 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 NENFQ9UMX5 172 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ITM2BQ9Y287 266 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 MFHAS1Q9Y4C4 1052 aa9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CNOT1A5YKK6 2376 aaKnown RBP9.36□□□□□ -0.91
RFX3-AS1-202ENST00000427722 TNRC6BQ9UPQ9 1833 aaKnown RBP9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 NUMA1Q14980 2115 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 A0A1W2PR77 199 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 J3KR12 359 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 MYO1FO00160 1098 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 NEMP1O14524 444 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 AKR1B10O60218 316 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PRAMEF11O60813 436 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 POP4O95707 220 aaKnown RBP9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ZNF883P0CG24 379 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 RARAP10276 462 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 NUDT1P36639 197 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ARL4AP40617 200 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ABL2P42684 1182 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PAPOLAP51003 745 aaKnown RBP9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ZNF135P52742 658 aaPredicted RBP9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 NDST2P52849 883 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ADKP55263 362 aaKnown RBP9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 NXPH1P58417 271 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SLC25A11Q02978 314 aaKnown RBP9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 DPYSQ14117 519 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 KRT81Q14533 505 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ACAP1Q15027 740 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 DPYSL2Q16555 572 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SLC18A3Q16572 532 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ZNF284Q2VY69 593 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 MYLK3Q32MK0 819 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ZNF805Q5CZA5 627 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PRAMEF14Q5SWL7 426 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ARHGAP36Q6ZRI8 547 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CYP4X1Q8N118 509 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 NIPA2Q8N8Q9 360 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 TMEM145Q8NBT3 493 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SETD7Q8WTS6 366 aaKnown RBP9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CASKIN2Q8WXE0 1202 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CTNNBL1Q8WYA6 563 aaPredicted RBP9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 LRIG1Q96JA1 1093 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 KLHL32Q96NJ5 620 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CSPG4P5Q96PW8 444 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 OSBPL1AQ9BXW6 950 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SLC39A8Q9C0K1 460 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 GDF3Q9NR23 364 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ABHD10Q9NUJ1 306 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SPTLC3Q9NUV7 552 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 KLHL11Q9NVR0 708 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 CWC15Q9P013 229 aaKnown RBP9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 LHX3Q9UBR4 397 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 ANGPTL2Q9UKU9 493 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 DMTF1Q9Y222 760 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PCDHB9Q9Y5E1 797 aa9.35□□□□□ -0.91
RFX3-AS1-202ENST00000427722 A0A1B0GTQ1 180 aa9.34□□□□□ -0.91
RFX3-AS1-202ENST00000427722 SSU72P8A0A1W2PR75 194 aa9.34□□□□□ -0.91
RFX3-AS1-202ENST00000427722 C16orf96A6NNT2 1141 aa9.34□□□□□ -0.91
RFX3-AS1-202ENST00000427722 TMEM110-MUSTN1A8MSY1 372 aa9.34□□□□□ -0.91
RFX3-AS1-202ENST00000427722 PRAMEF26H0Y7S4 382 aa9.34□□□□□ -0.91
RFX3-AS1-202ENST00000427722 TLR4O00206 839 aa9.34□□□□□ -0.91
RFX3-AS1-202ENST00000427722 INSIG1O15503 277 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms