RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TRPC5OSA6NMA1 111 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 PSMD12O00232 456 aaPredicted RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 XPOTO43592 962 aaKnown RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 DDNO94850 711 aaPredicted RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TMCC1O94876 653 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 PNPLA4P41247 253 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 NR1H2P55055 460 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 DAOAP59103 153 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 PCSK7Q16549 785 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 UGP2Q16851 508 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 PABPC1LQ4VXU2 614 aaKnown RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 MTX3Q5HYI7 312 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 PCID2Q5JVF3 399 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TSTD2Q5T7W7 516 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 ALKAL1Q6UXT8 129 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 TICAM1Q8IUC6 712 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 OR6J1Q8NGC5 347 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 OR9I1Q8NGQ6 314 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 DDI1Q8WTU0 396 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 ABTB1Q969K4 478 aaPredicted RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC2A13Q96QE2 648 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC29A1Q99808 456 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 RHOBTB2Q9BYZ6 727 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 SENP6Q9GZR1 1112 aaPredicted RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 EPB41L1Q9H4G0 881 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 ZNF696Q9H7X3 374 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 RHBDL2Q9NX52 303 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 NSMCE4AQ9NXX6 385 aa7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 GMPR2Q9P2T1 348 aaKnown RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 HEMK1Q9Y5R4 338 aaPredicted RBP7.61□□□□□ -1.19
SMARCC1-202ENST00000425518 CXCL11O14625 94 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 DYNC1LI2O43237 492 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 DARSP14868 501 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ZNF26P17031 533 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 KCNA5P22460 613 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SOX11P35716 441 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 CHRNA4P43681 627 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 HSPA13P48723 471 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 PRKAA2P54646 552 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 STX5Q13190 355 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 MAP7D1Q3KQU3 841 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 NOMO2Q5JPE7 1267 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 DPP9Q86TI2 863 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 LINC00523Q86TU6 105 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 HERC6Q8IVU3 1022 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ARRDC4Q8NCT1 418 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 DIS3LQ8TF46 1054 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TMEM40Q8WWA1 233 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 UPF1Q92900 1129 aaKnown RBP eCLIP7.6□□□□□ -1.198e-12■■■■□ 23.8
SMARCC1-202ENST00000425518 HDAC11Q96DB2 347 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TBL1YQ9BQ87 522 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 KIFC1Q9BW19 673 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TNFRSF12AQ9NP84 129 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 VPS28Q9UK41 221 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 DMTF1Q9Y222 760 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 PCDHGA7Q9Y5G6 932 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 NRCAMQ92823 1304 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 HEATR9A2RTY3 570 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 PRORSD1PA6NEY8 169 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ZNF839A8K0R7 811 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TARM1B6A8C7 271 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TPST1O60507 370 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 GPR32O75388 356 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TIPRLO75663 272 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SMPD1P17405 629 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 RPL10P27635 214 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ADSLP30566 484 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC5A2P31639 672 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC1A2P43004 574 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 CD151P48509 253 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 CDH15P55291 814 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 GALNT2Q10471 571 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 HERC3Q15034 1050 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 RBM20Q5T481 1227 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TWF2Q6IBS0 349 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ZBTB49Q6ZSB9 765 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 PPHLN1Q8NEY8 458 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SPPL2BQ8TCT7 592 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC16A10Q8TF71 515 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 EXT2Q93063 718 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 GPR78Q96P69 363 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC9A7Q96T83 725 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SMOQ99835 787 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 FSD1LQ9BXM9 530 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ZNF385DQ9H6B1 395 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 CRTAC1Q9NQ79 661 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 HSFX1Q9UBD0 423 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TMCO1Q9UM00 188 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 AURKCQ9UQB9 309 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 RNF11Q9Y3C5 154 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC22A2O15244 555 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 AKAP10O43572 662 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 TRMUO75648 421 aaKnown RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SEC24DO94855 1032 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 STAMBPO95630 424 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 ATP5F1P24539 256 aaPredicted RBP7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 YWHAQP27348 245 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 C1QTNF8P60827 252 aa7.6□□□□□ -1.19
SMARCC1-202ENST00000425518 SEMA3BQ13214 749 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms