RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ITGAVP06756 1048 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 SKILP12757 684 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 L1CAMP32004 1257 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 PRKCIP41743 596 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 CCR5P51681 352 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 AIF1P55008 147 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 GEMIN4P57678 1058 aaKnown RBP12.95□□□□□ -0.34
SGCE-203ENST00000425444 PPP2CBP62714 309 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 PPP2CAP67775 309 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 ARF5P84085 180 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 SLC20A2Q08357 652 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 VAC14Q08AM6 782 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 NFATC3Q12968 1075 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 FIGNQ5HY92 759 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 ARTNQ5T4W7 220 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 AGBL4Q5VU57 503 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 VPS36Q86VN1 386 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 NLRP14Q86W24 1093 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 DNAAF5Q86Y56 855 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 PYROXD2Q8N2H3 581 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 EID2Q8N6I1 236 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 CHST14Q8NCH0 376 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 SKA1Q96BD8 255 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 TRIM11Q96F44 468 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 PPP1R16AQ96I34 528 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.95□□□□□ -0.34
SGCE-203ENST00000425444 CEP44Q9C0F1 390 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 MAGEH1Q9H213 219 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 CNOT8Q9UFF9 292 aaKnown RBP12.95□□□□□ -0.34
SGCE-203ENST00000425444 IL36AQ9UHA7 158 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 TPX2Q9ULW0 747 aaKnown RBP12.95□□□□□ -0.34
SGCE-203ENST00000425444 FZD10Q9ULW2 581 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 NEU3Q9UQ49 428 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 FCF1Q9Y324 198 aaKnown RBP12.95□□□□□ -0.34
SGCE-203ENST00000425444 SCINQ9Y6U3 715 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 TP53BP1Q12888 1972 aaPredicted RBP12.94□□□□□ -0.34
SGCE-203ENST00000425444 DDX3XO00571 662 aaKnown RBP eCLIP12.94□□□□□ -0.342e-26■■■□□ 14.6
SGCE-203ENST00000425444 PLRG1O43660 514 aaKnown RBP12.94□□□□□ -0.34
SGCE-203ENST00000425444 ZMPSTE24O75844 475 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 TPM3P06753 285 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 CTSLP07711 333 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 MAT2AP31153 395 aaKnown RBP12.94□□□□□ -0.34
SGCE-203ENST00000425444 OGDHQ02218 1023 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 CCDC15Q0P6D6 951 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 MAMLD1Q13495 774 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 POLD3Q15054 466 aaPredicted RBP12.94□□□□□ -0.34
SGCE-203ENST00000425444 SLC45A4Q5BKX6 768 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 C6orf132Q5T0Z8 1188 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 PLEKHA7Q6IQ23 1121 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 KDM7AQ6ZMT4 941 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 DPY19L3Q6ZPD9 716 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 PRPF39Q86UA1 669 aaKnown RBP12.94□□□□□ -0.34
SGCE-203ENST00000425444 RYBPQ8N488 228 aaPredicted RBP12.94□□□□□ -0.34
SGCE-203ENST00000425444 PCDH20Q8N6Y1 951 aaKnown RBP12.94□□□□□ -0.34
SGCE-203ENST00000425444 RTL3Q8N8U3 475 aaKnown RBP12.94□□□□□ -0.34
SGCE-203ENST00000425444 CPLX3Q8WVH0 158 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 KCNE4Q8WWG9 221 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 HIC2Q96JB3 615 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 SERAC1Q96JX3 654 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 ZNF578Q96N58 590 aaPredicted RBP12.94□□□□□ -0.34
SGCE-203ENST00000425444 ORAI3Q9BRQ5 295 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 TM6SF2Q9BZW4 377 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 KDM4CQ9H3R0 1056 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 CATSPERBQ9H7T0 1116 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 MYO1AQ9UBC5 1043 aa12.94□□□□□ -0.34
SGCE-203ENST00000425444 DOCK4Q8N1I0 1966 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 A0A1W2PQJ5 194 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 LEFTY1O75610 366 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 RNF8O76064 485 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 MYBL1P10243 752 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 GZMAP12544 262 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 CD38P28907 300 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 CCNHP51946 323 aaPredicted RBP12.93□□□□□ -0.34
SGCE-203ENST00000425444 TPI1P60174 286 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 ILKQ13418 452 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 CARD16Q5EG05 197 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 ARSIQ5FYB1 569 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 NAPEPLDQ6IQ20 393 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 LEKR1Q6ZMV7 388 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 ZNF574Q6ZN55 896 aaPredicted RBP12.93□□□□□ -0.34
SGCE-203ENST00000425444 DCBLD1Q8N8Z6 715 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 TMIEQ8NEW7 156 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 TSC1Q92574 1164 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 ARHGEF2Q92974 986 aaKnown RBP12.93□□□□□ -0.34
SGCE-203ENST00000425444 FAM131CQ96AQ9 280 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 ARRDC3Q96B67 414 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 IQCDQ96DY2 449 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 ELF4Q99607 663 aaPredicted RBP12.93□□□□□ -0.34
SGCE-203ENST00000425444 HEPHQ9BQS7 1158 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 DHX35Q9H5Z1 703 aaKnown RBP12.93□□□□□ -0.34
SGCE-203ENST00000425444 ZDHHC6Q9H6R6 413 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 EBF2Q9HAK2 575 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 PREBQ9HCU5 417 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 MRPL47Q9HD33 250 aaKnown RBP12.93□□□□□ -0.34
SGCE-203ENST00000425444 GPATCH2LQ9NWQ4 482 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 ANKMY1Q9P2S6 941 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 PCSK1NQ9UHG2 260 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 AP4E1Q9UPM8 1137 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms