RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CNPY4Q8N129 248 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 UHMK1Q8TAS1 419 aaKnown RBP15.88■□□□□ 0.13
SHOX2-202ENST00000425436 EPS8L3Q8TE67 593 aaKnown RBP15.88■□□□□ 0.13
SHOX2-202ENST00000425436 HTR3CQ8WXA8 447 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 ERLEC1Q96DZ1 483 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 PWWP2AQ96N64 755 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 SPON2Q9BUD6 331 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 C10orf88Q9H8K7 445 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 LRRC4CQ9HCJ2 640 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 ETNK2Q9NVF9 386 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 DLGAP2Q9P1A6 1054 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 VPS28Q9UK41 221 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 STARD13Q9Y3M8 1113 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 OR51B4Q9Y5P0 310 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 ZDBF2Q9HCK1 2354 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 WASH4PA8MWX3 477 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 WASH3PC4AMC7 463 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 GSTA2P09210 222 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 TPSB2P20231 275 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 GLDCP23378 1020 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 ACVRL1P37023 503 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 MAPKAPK2P49137 400 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 GNA12Q03113 381 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 SLC10A2Q12908 348 aaPredicted RBP15.87■□□□□ 0.13
SHOX2-202ENST00000425436 TPSAB1Q15661 275 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 LONRF1Q17RB8 773 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 KLHL38Q2WGJ6 581 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 FBXO43Q4G163 708 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 CCDC38Q502W7 563 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 TMEM31Q5JXX7 168 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 PALM2Q8IXS6 379 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 ZNF513Q8N8E2 541 aaPredicted RBP15.87■□□□□ 0.13
SHOX2-202ENST00000425436 WFIKKN2Q8TEU8 576 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 USP33Q8TEY7 942 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 CELF6Q96J87 481 aaKnown RBP15.87■□□□□ 0.13
SHOX2-202ENST00000425436 NOL6Q9H6R4 1146 aaKnown RBP15.87■□□□□ 0.13
SHOX2-202ENST00000425436 VPS37BQ9H9H4 285 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 C2orf42Q9NWW7 574 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 SENP1Q9P0U3 644 aa15.87■□□□□ 0.13
SHOX2-202ENST00000425436 EXOC1LA0A1B0GW35 172 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 ILVBLA1L0T0 632 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 SMIM23A6NLE4 172 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 DCLK1O15075 740 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 TIMM44O43615 452 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 SNAP91O60641 907 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 OPHN1O60890 802 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 KLF8O95600 359 aaPredicted RBP15.86■□□□□ 0.13
SHOX2-202ENST00000425436 CHRM1P11229 460 aaPredicted RBP15.86■□□□□ 0.13
SHOX2-202ENST00000425436 LSP1P33241 339 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 PLK1P53350 603 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 OXCT1P55809 520 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 ZNF33AQ06730 810 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 MTAPQ13126 283 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 SLC12A1Q13621 1099 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 POLD3Q15054 466 aaPredicted RBP15.86■□□□□ 0.13
SHOX2-202ENST00000425436 SKIDA1Q1XH10 827 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 ANKRD22Q5VYY1 191 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 IL31Q6EBC2 164 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 ARHGEF18Q6ZSZ5 1173 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 TP53INP2Q8IXH6 220 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 SYNPOQ8N3V7 929 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 IL17RCQ8NAC3 791 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 TXNDC5Q8NBS9 432 aaKnown RBP15.86■□□□□ 0.13
SHOX2-202ENST00000425436 ARHGEF2Q92974 986 aaKnown RBP15.86■□□□□ 0.13
SHOX2-202ENST00000425436 TTC17Q96AE7 1141 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 RPL10LQ96L21 214 aaKnown RBP15.86■□□□□ 0.13
SHOX2-202ENST00000425436 EPN3Q9H201 632 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 CACNA2D2Q9NY47 1150 aa15.86■□□□□ 0.13
SHOX2-202ENST00000425436 WDFY4Q6ZS81 3184 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 PRR33A8MZF0 331 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 RAMP2O60895 175 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 ATP5BP06576 529 aaKnown RBP15.85■□□□□ 0.13
SHOX2-202ENST00000425436 AVPR2P30518 371 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 SLCO1A2P46721 670 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 RPS9P46781 194 aaKnown RBP15.85■□□□□ 0.13
SHOX2-202ENST00000425436 STK19P49842 368 aaPredicted RBP15.85■□□□□ 0.13
SHOX2-202ENST00000425436 MRPS21P82921 87 aaKnown RBP15.85■□□□□ 0.13
SHOX2-202ENST00000425436 ECT2LQ008S8 904 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 DMC1Q14565 340 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 ZNF234Q14588 700 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 PRKD1Q15139 912 aaPredicted RBP15.85■□□□□ 0.13
SHOX2-202ENST00000425436 ZSCAN26Q16670 478 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 PTPRNQ16849 979 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 ZNF354CQ86Y25 554 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 CHPFQ8IZ52 775 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 NPWQ8N729 165 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 UCMAQ8WVF2 138 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 SPATA13Q96N96 652 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 C1QTNF1Q9BXJ1 281 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 SLC39A8Q9C0K1 460 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 CHRDQ9H2X0 955 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 RETREG1Q9H6L5 497 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 XAB2Q9HCS7 855 aaKnown RBP15.85■□□□□ 0.13
SHOX2-202ENST00000425436 ATP13A1Q9HD20 1204 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 DONSONQ9NYP3 566 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 PLA2G4CQ9UP65 541 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 ERVW-1Q9UQF0 538 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 CHD5Q8TDI0 1954 aa15.85■□□□□ 0.13
SHOX2-202ENST00000425436 RASA4BC9J798 803 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 GOLGA8MH3BSY2 632 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms