RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ARHGEF7Q14155 803 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 TBRG1Q3YBR2 411 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 FUT11Q495W5 492 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 GALNTL6Q49A17 601 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 FILIP1LQ4L180 1135 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 SLC39A12Q504Y0 691 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF484Q5JVG2 852 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 CBWD5Q5RIA9 395 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 PM20D1Q6GTS8 502 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 RBM43Q6ZSC3 357 aaKnown RBP3.82□□□□□ -1.8
SF3B1-205ENST00000424674 ADCK2Q7Z695 626 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 DSG4Q86SJ6 1040 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 CDH26Q8IXH8 852 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 GSPT2Q8IYD1 628 aaKnown RBP3.82□□□□□ -1.8
SF3B1-205ENST00000424674 MYOCDQ8IZQ8 938 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 FBXW8Q8N3Y1 598 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 DNAJC5GQ8N7S2 189 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 MB21D1Q8N884 522 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 FSIP1Q8NA03 581 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 IQUBQ8NA54 791 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 XXYLT1Q8NBI6 393 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 TNIP2Q8NFZ5 429 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 URGCPQ8TCY9 931 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 HMGB4Q8WW32 186 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.82□□□□□ -1.8
SF3B1-205ENST00000424674 SMARCE1Q969G3 411 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 PERPQ96FX8 193 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 RBM17Q96I25 401 aaKnown RBP3.82□□□□□ -1.8
SF3B1-205ENST00000424674 MED15Q96RN5 788 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 MGME1Q9BQP7 344 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 SLC39A3Q9BRY0 314 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 HTATIP2Q9BUP3 242 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 CCDC94Q9BW85 323 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-205ENST00000424674 C1orf43Q9BWL3 253 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 IMPG2Q9BZV3 1241 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 TRIM7Q9C029 511 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 STN1Q9H668 368 aaKnown RBP3.82□□□□□ -1.8
SF3B1-205ENST00000424674 SYNPO2LQ9H987 977 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 SCPEP1Q9HB40 452 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 SEMA4BQ9NPR2 832 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-205ENST00000424674 GLRX2Q9NS18 164 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 MPP6Q9NZW5 540 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 LRIT1Q9P2V4 623 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 ARMCX3Q9UH62 379 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-205ENST00000424674 AJAP1Q9UKB5 411 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-205ENST00000424674 RCOR1Q9UKL0 485 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 BAG5Q9UL15 447 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 PLEKHM1Q9Y4G2 1056 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 CAPN7Q9Y6W3 813 aa3.82□□□□□ -1.8
SF3B1-205ENST00000424674 MYBBP1AQ9BQG0 1328 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SALL3Q9BXA9 1300 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PNMA6EA0A0J9YXQ4 647 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 LOC102723971A0A1B0GUV8 181 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 FAM237BA0A1B0GVD1 139 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ZSCAN5CA6NGD5 496 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 A8MZ25 164 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CCDC188H7C350 402 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 J3KTA2 159 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 VWA5AO00534 786 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 RASGRF2O14827 1237 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 IFIT3O14879 490 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 TO15178 435 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 TGFB1I1O43294 461 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 MFAP3LO75121 409 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 STC2O76061 302 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SEC24DO94855 1032 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 LETM1O95202 739 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 OR2C1O95371 312 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 IPO7O95373 1038 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 YEATS4O95619 227 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 GNAI2P04899 355 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CFIP05156 583 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CCDC172P0C7W6 258 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CCDC192P0DO97 292 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SKILP12757 684 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ACTN1P12814 892 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ALADP13716 330 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PTGS2P35354 604 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 EPS15P42566 896 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 KIR2DL3P43628 341 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SLC6A9P48067 706 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ARCN1P48444 511 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 GCLCP48506 637 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CENPAP49450 140 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 RABGGTBP53611 331 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SNU13P55769 128 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PER3P56645 1201 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 KIAA1024LP59773 190 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 YWHAZP63104 245 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ASIC1P78348 528 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 OLR1P78380 273 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SLC25A3Q00325 362 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 RELQ04864 619 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PRKCZQ05513 592 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ELP6Q0PNE2 266 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 GPS1Q13098 491 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PDCLQ13371 301 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 TRA2AQ13595 282 aaKnown RBP eCLIP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 FRG1Q14331 258 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 RPS6KA1Q15418 735 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms