RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 LRRC19Q9H756 370 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 KLHL11Q9NVR0 708 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 PCSK1NQ9UHG2 260 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 AP4E1Q9UPM8 1137 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 ITM2BQ9Y287 266 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 HS3ST3A1Q9Y663 406 aa18.74■□□□□ 0.59
NUP50-207ENST00000424634 IGLON5A6NGN9 336 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 INSIG1O15503 277 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 PBX1P40424 430 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 FANCCQ00597 558 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 KLHL40Q2TBA0 621 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 PARP15Q460N3 678 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 FIGNQ5HY92 759 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 ERMARDQ5T6L9 678 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 GDPD4Q6W3E5 623 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 Q6ZSR6 202 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 KCTD15Q96SI1 283 aaPredicted RBP18.73■□□□□ 0.59
NUP50-207ENST00000424634 KLF6Q99612 283 aaPredicted RBP18.73■□□□□ 0.59
NUP50-207ENST00000424634 C1QTNF2Q9BXJ5 285 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 CALN1Q9BXU9 219 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 DHX35Q9H5Z1 703 aaKnown RBP18.73■□□□□ 0.59
NUP50-207ENST00000424634 UCKL1Q9NWZ5 548 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 LHX3Q9UBR4 397 aa18.73■□□□□ 0.59
NUP50-207ENST00000424634 CNOT8Q9UFF9 292 aaKnown RBP18.73■□□□□ 0.59
NUP50-207ENST00000424634 J3KR12 359 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 TRIM38O00635 465 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 AREL1O15033 823 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 FGF10O15520 208 aaPredicted RBP18.72■□□□□ 0.59
NUP50-207ENST00000424634 TSPAN6O43657 245 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 ITIH2P19823 946 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 MIPP30301 263 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 ACADVLP49748 655 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 CLDN6P56747 220 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 TPI1P60174 286 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 CAMK2BQ13554 666 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 LRRC73Q5JTD7 316 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 HGSNATQ68CP4 663 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 KDM7AQ6ZMT4 941 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 CASKIN2Q8WXE0 1202 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 RAB7BQ96AH8 199 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 CELF6Q96J87 481 aaKnown RBP18.72■□□□□ 0.59
NUP50-207ENST00000424634 GDAP1L1Q96MZ0 367 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 SNRNP25Q9BV90 132 aaKnown RBP18.72■□□□□ 0.59
NUP50-207ENST00000424634 OSBPL1AQ9BXW6 950 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 SLC39A8Q9C0K1 460 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 ISCUQ9H1K1 167 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 PDFQ9HBH1 243 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 GPR27Q9NS67 375 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 MFHAS1Q9Y4C4 1052 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 PCDHGA1Q9Y5H4 931 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 APC2O95996 2303 aa18.72■□□□□ 0.59
NUP50-207ENST00000424634 ACACAQ13085 2346 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 EEF2KO00418 725 aaKnown RBP18.71■□□□□ 0.59
NUP50-207ENST00000424634 GIMD1P0DJR0 217 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 TIMP2P16035 220 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 DGKAP23743 735 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 HTR7P34969 479 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 NDST2P52849 883 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 RHOAP61586 193 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 ZNF542PQ5EBM4 170 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 TTC7BQ86TV6 843 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 PROSER1Q86XN7 944 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 GALNT15Q8N3T1 639 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 MDM1Q8TC05 714 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 FNIP1Q8TF40 1166 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 ZNF653Q96CK0 615 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 EXOC2Q96KP1 924 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 LENG8Q96PV6 779 aaPredicted RBP18.71■□□□□ 0.59
NUP50-207ENST00000424634 MYO1AQ9UBC5 1043 aa18.71■□□□□ 0.59
NUP50-207ENST00000424634 RALYQ9UKM9 306 aaKnown RBP18.71■□□□□ 0.59
NUP50-207ENST00000424634 MYLKQ15746 1914 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 TRABD2BA6NFA1 517 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 A6NNZ2 444 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 SIGLEC6O43699 453 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 LRCH4O75427 683 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 RNF8O76064 485 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 IGSF6O95976 241 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 DESP17661 470 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 PAPOLAP51003 745 aaKnown RBP18.7■□□□□ 0.58
NUP50-207ENST00000424634 SGCGQ13326 291 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 LRRK1Q38SD2 2015 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 PROX2Q3B8N5 592 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 TPRG1LQ5T0D9 272 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 AFMIDQ63HM1 303 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 KYAT3Q6YP21 454 aaKnown RBP18.7■□□□□ 0.58
NUP50-207ENST00000424634 ARHGAP12Q8IWW6 846 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 ASB12Q8WXK4 309 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 CPEB1Q9BZB8 566 aaKnown RBP18.7■□□□□ 0.58
NUP50-207ENST00000424634 UBA2Q9UBT2 640 aaPredicted RBP18.7■□□□□ 0.58
NUP50-207ENST00000424634 NBEAQ8NFP9 2946 aa18.7■□□□□ 0.58
NUP50-207ENST00000424634 ZFYVE26Q68DK2 2539 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 NEMP1O14524 444 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 PRAMEF11O60813 436 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 RFPL3O75679 317 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 PIAS2O75928 621 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 C1SP09871 688 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 CKMT2P17540 419 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 ERCC2P18074 760 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 UBASH3AP57075 661 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 RAD51Q06609 339 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms