RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 LRRC19Q9H756 370 aa18.02■□□□□ 0.48
HDLBP-208ENST00000422080 GPR27Q9NS67 375 aa18.02■□□□□ 0.48
HDLBP-208ENST00000422080 NYNRINQ9P2P1 1898 aaKnown RBP18.02■□□□□ 0.48
HDLBP-208ENST00000422080 DKK3Q9UBP4 350 aa18.02■□□□□ 0.48
HDLBP-208ENST00000422080 CNOT8Q9UFF9 292 aaKnown RBP18.02■□□□□ 0.48
HDLBP-208ENST00000422080 AP4E1Q9UPM8 1137 aa18.02■□□□□ 0.48
HDLBP-208ENST00000422080 IGLON5A6NGN9 336 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 NEMP1O14524 444 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 AREL1O15033 823 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 RFPL3O75679 317 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 RNF8O76064 485 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 MYBL1P10243 752 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 CKMT2P17540 419 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 DGKAP23743 735 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 RHOAP61586 193 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 TPM4P67936 248 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 ZNF211Q13398 564 aaPredicted RBP18.01■□□□□ 0.47
HDLBP-208ENST00000422080 CYTH1Q15438 398 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 KLHL40Q2TBA0 621 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 KYAT3Q6YP21 454 aaKnown RBP18.01■□□□□ 0.47
HDLBP-208ENST00000422080 TTC7BQ86TV6 843 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 HCAR2Q8TDS4 363 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 KLF6Q99612 283 aaPredicted RBP18.01■□□□□ 0.47
HDLBP-208ENST00000422080 CALN1Q9BXU9 219 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 CPEB1Q9BZB8 566 aaKnown RBP18.01■□□□□ 0.47
HDLBP-208ENST00000422080 DHX35Q9H5Z1 703 aaKnown RBP18.01■□□□□ 0.47
HDLBP-208ENST00000422080 CBX8Q9HC52 389 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 GPATCH2LQ9NWQ4 482 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 SCINQ9Y6U3 715 aa18.01■□□□□ 0.47
HDLBP-208ENST00000422080 POM121BA6NF01 834 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 EEF2KO00418 725 aaKnown RBP18■□□□□ 0.47
HDLBP-208ENST00000422080 RAD51BO15315 384 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 ATMINO43313 823 aaPredicted RBP18■□□□□ 0.47
HDLBP-208ENST00000422080 PRPSAP2O60256 369 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 SDC3O75056 442 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 SKILP12757 684 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 MIPP30301 263 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 RABIFP47224 123 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 SUOXP51687 545 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 ZNF135P52742 658 aaPredicted RBP18■□□□□ 0.47
HDLBP-208ENST00000422080 CAMK2BQ13554 666 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 CA9Q16790 459 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 PROX2Q3B8N5 592 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 DNAAF5Q86Y56 855 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 SLC22A18ASQ8N1D0 253 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 DENND6BQ8NEG7 585 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 SYN2Q92777 582 aaPredicted RBP18■□□□□ 0.47
HDLBP-208ENST00000422080 ISCUQ9H1K1 167 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 PDFQ9HBH1 243 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 MRPL47Q9HD33 250 aaKnown RBP18■□□□□ 0.47
HDLBP-208ENST00000422080 UBA2Q9UBT2 640 aaPredicted RBP18■□□□□ 0.47
HDLBP-208ENST00000422080 DKK4Q9UBT3 224 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 PCSK1NQ9UHG2 260 aa18■□□□□ 0.47
HDLBP-208ENST00000422080 BZW2Q9Y6E2 419 aaKnown RBP18■□□□□ 0.47
HDLBP-208ENST00000422080 TMEM131Q92545 1883 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 ZZEF1O43149 2961 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 A0A1W2PQJ5 194 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 SYCE3A1L190 88 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 FAM149AA5PLN7 773 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 TRABD2BA6NFA1 517 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 ARHGAP42A6NI28 874 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 TRIM38O00635 465 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 FPGTO14772 594 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 SPINT1O43278 529 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 PRAMEF11O60813 436 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 PIAS2O75928 621 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 TIMP2P16035 220 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 HCAR3P49019 387 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 FANCCQ00597 558 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 GRM3Q14832 879 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 PTAR1Q7Z6K3 402 aaPredicted RBP17.99■□□□□ 0.47
HDLBP-208ENST00000422080 MARCH9Q86YJ5 346 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 PDCD7Q8N8D1 485 aaKnown RBP17.99■□□□□ 0.47
HDLBP-208ENST00000422080 OR4C6Q8NH72 309 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 ZNF653Q96CK0 615 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 PEBP4Q96S96 227 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 KCTD15Q96SI1 283 aaPredicted RBP17.99■□□□□ 0.47
HDLBP-208ENST00000422080 SNRNP25Q9BV90 132 aaKnown RBP17.99■□□□□ 0.47
HDLBP-208ENST00000422080 TRIM7Q9C029 511 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 LHX3Q9UBR4 397 aa17.99■□□□□ 0.47
HDLBP-208ENST00000422080 COL5A1P20908 1838 aaPredicted RBP17.99■□□□□ 0.47
HDLBP-208ENST00000422080 CFAP47Q6ZTR5 3102 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 SPTY2D1-AS1A0A0U1RR47 76 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 NEMP2A6NFY4 417 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 J3KR12 359 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 DAPK3O43293 454 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 SIGLEC6O43699 453 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 JUPP14923 745 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 ACP1P24666 158 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 PCK1P35558 622 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 PBX1P40424 430 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 PAPOLAP51003 745 aaKnown RBP17.98■□□□□ 0.47
HDLBP-208ENST00000422080 UBASH3AP57075 661 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 HNRNPKP61978 463 aaKnown RBP eCLIP17.98■□□□□ 0.471e-6■■■□□ 19.2
HDLBP-208ENST00000422080 ACAP1Q15027 740 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 HS1BP3Q53T59 392 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 AFMIDQ63HM1 303 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 RFX8Q6ZV50 586 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 LUZP1Q86V48 1076 aa17.98■□□□□ 0.47
HDLBP-208ENST00000422080 NETO2Q8NC67 525 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms