RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 LPIN1Q14693 890 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 BHLHA9Q7RTU4 235 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 IFNEQ86WN2 208 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 CMTM5Q96DZ9 223 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 MYEOVQ96EZ4 313 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 ZNF184Q99676 751 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-213ENST00000421756 PCDHAC1Q9H158 963 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 TNFRSF12AQ9NP84 129 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 STX18Q9P2W9 335 aaKnown RBP13.49□□□□□ -0.25
MCF2L-213ENST00000421756 POMPQ9Y244 141 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 ARL5AQ9Y689 179 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 IRAK2O43187 625 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 DNAJA2O60884 412 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 YWHAQP27348 245 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 PIK3R1P27986 724 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 BLMHQ13867 455 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 ZRSR2Q15696 482 aaKnown RBP13.49□□□□□ -0.25
MCF2L-213ENST00000421756 CTXN3Q4LDR2 81 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 PKN3Q6P5Z2 889 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 GLB1LQ6UWU2 654 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 C16orf59Q7L2K0 433 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 CENPLQ8N0S6 344 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-213ENST00000421756 GDPD5Q8WTR4 605 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 FBXO32Q969P5 355 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 HDAC11Q96DB2 347 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 RMDN1Q96DB5 314 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 SCOCQ9UIL1 159 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 LRRC42Q9Y546 428 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 SIP14410 1827 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 XIRP2A4UGR9 3374 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 KCNU1A8MYU2 1149 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 MAFKO60675 156 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 LMNAP02545 664 aaKnown RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 LINGO3P0C6S8 592 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 ATP6V1B1P15313 513 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 CES1P23141 567 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 OR1E1P30953 314 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 RPL14P50914 215 aaKnown RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 KCNQ1P51787 676 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 BTKQ06187 659 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 SFT2D3Q587I9 215 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 RASIP1Q5U651 963 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 LRRC8EQ6NSJ5 796 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 DCLRE1AQ6PJP8 1040 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 ARHGAP12Q8IWW6 846 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 TXNDC5Q8NBS9 432 aaKnown RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 OR13C4Q8NGS5 318 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 OLFM1Q99784 485 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 MARCH4Q9P2E8 410 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 PGM3O95394 542 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 XRCC1P18887 633 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 TBX4P57082 545 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 CAP1Q01518 475 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 DUSP4Q13115 394 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 PIK3R6Q5UE93 754 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 TRIM67Q6ZTA4 783 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 OR6K2Q8NGY2 324 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 ANKRD49Q8WVL7 239 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 SENP6Q9GZR1 1112 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 CCSER2Q9H7U1 834 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 RCOR3Q9P2K3 495 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 ARHGAP26Q9UNA1 814 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 SMNDC1O75940 238 aaKnown RBP eCLIP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 WFS1O76024 890 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 LUC7L3O95232 432 aaKnown RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 HOXD8P13378 290 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 PMLP29590 882 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 CPOXP36551 454 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 SCNN1BP51168 640 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 THOP1P52888 689 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 CSE1LP55060 971 aaKnown RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 ACTR3P61158 418 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 ECT2LQ008S8 904 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 TAF10Q12962 218 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 NRF1Q16656 503 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 PCID2Q5JVF3 399 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 MFSD14CQ5VZR4 134 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 IYDQ6PHW0 289 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 ACAD11Q709F0 780 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 TMEM86AQ8N2M4 240 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 IGSF8Q969P0 613 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 SEMA3CQ99985 751 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 TLE6Q9H808 572 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 YY1AP1Q9H869 796 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 ZFYVE28Q9HCC9 887 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 TRPC7Q9HCX4 862 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-213ENST00000421756 PCDHB12Q9Y5F1 795 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 KNL1Q8NG31 2342 aa13.48□□□□□ -0.25
MCF2L-213ENST00000421756 A0A0D9SEW6 157 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 HNRNPCL1O60812 293 aaKnown RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 RAB10P61026 200 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 SEMA3BQ13214 749 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 TUSC3Q13454 348 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 FLOT2Q14254 428 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 CCDC153Q494R4 210 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms