RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 SLCO2A1Q92959 643 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 GORASP1Q9BQQ3 440 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 TRIM51Q9BSJ1 452 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 SLC6A17Q9H1V8 727 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 PCDH9Q9HC56 1237 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 CD248Q9HCU0 757 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 RRAGDQ9NQL2 400 aaPredicted RBP15.91■□□□□ 0.14
DDX55-203ENST00000421670 UBP1Q9NZI7 540 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 DLGAP2Q9P1A6 1054 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 IL36AQ9UHA7 158 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 NEU2Q9Y3R4 380 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 WASF2Q9Y6W5 498 aa15.91■□□□□ 0.14
DDX55-203ENST00000421670 CACNA1IQ9P0X4 2223 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 RAD51CO43502 376 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 LEFTY1O75610 366 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 MT-CYBP00156 380 aaPredicted RBP15.9■□□□□ 0.14
DDX55-203ENST00000421670 ACTN2P35609 894 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 COPAP53621 1224 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 TERF1P54274 439 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 MYLK3Q32MK0 819 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 POM121L1PQ3SYA9 428 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 SYCP2LQ5T4T6 812 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 SYT13Q7L8C5 426 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 PRPF39Q86UA1 669 aaKnown RBP15.9■□□□□ 0.14
DDX55-203ENST00000421670 JAMLQ86YT9 394 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 PBXIP1Q96AQ6 731 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 IMP4Q96G21 291 aaKnown RBP15.9■□□□□ 0.14
DDX55-203ENST00000421670 OXNAD1Q96HP4 312 aaPredicted RBP15.9■□□□□ 0.14
DDX55-203ENST00000421670 RUNDC3BQ96NL0 473 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 FAM129BQ96TA1 746 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 HEPHQ9BQS7 1158 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 MKRN2Q9H000 416 aaKnown RBP15.9■□□□□ 0.14
DDX55-203ENST00000421670 SLC25A51Q9H1U9 297 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 FEZ2Q9UHY8 353 aaPredicted RBP15.9■□□□□ 0.14
DDX55-203ENST00000421670 SARDHQ9UL12 918 aa15.9■□□□□ 0.14
DDX55-203ENST00000421670 FARP1Q9Y4F1 1045 aaPredicted RBP15.9■□□□□ 0.14
DDX55-203ENST00000421670 DMDP11532 3685 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 TCRBV21S2A2A0A5A6 115 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 FAM86C2PA6NEL3 165 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 ATG13O75143 517 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 SLC34A2O95436 690 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 IL1BP01584 269 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 UGT2B4P06133 528 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 PSMD8P48556 350 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 CSNK1DP48730 415 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 METAP1P53582 386 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 AP1S1P61966 158 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 DHX34Q14147 1143 aaKnown RBP15.89■□□□□ 0.13
DDX55-203ENST00000421670 ARSIQ5FYB1 569 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 NCEH1Q6PIU2 408 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 CAMK1DQ8IU85 385 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 MMAAQ8IVH4 418 aaKnown RBP15.89■□□□□ 0.13
DDX55-203ENST00000421670 PLPP6Q8IY26 295 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 HHIPQ96QV1 700 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 FCRL5Q96RD9 977 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 PAK5Q9P286 719 aa15.89■□□□□ 0.13
DDX55-203ENST00000421670 POP4O95707 220 aaKnown RBP15.88■□□□□ 0.13
DDX55-203ENST00000421670 SERPINF2P08697 491 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 SKOR1P84550 965 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 SATB1Q01826 763 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 GPS1Q13098 491 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 PTK6Q13882 451 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 PCSK7Q16549 785 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 C8orf74Q6P047 294 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 SPEM1Q8N4L4 309 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 OR2T3Q8NH03 318 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 PIP4K2CQ8TBX8 421 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 MLPHQ9BV36 600 aaPredicted RBP15.88■□□□□ 0.13
DDX55-203ENST00000421670 RSPH9Q9H1X1 276 aaPredicted RBP15.88■□□□□ 0.13
DDX55-203ENST00000421670 ATP13A3Q9H7F0 1226 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 RAB6BQ9NRW1 208 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 ASIC3Q9UHC3 531 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 PCDHGC4Q9Y5F7 938 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 VPS13AQ96RL7 3174 aa15.88■□□□□ 0.13
DDX55-203ENST00000421670 KPNA3O00505 521 aaPredicted RBP15.87■□□□□ 0.13
DDX55-203ENST00000421670 ALOX15BO15296 676 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 PMPCBO75439 489 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 SERPINA4P29622 427 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 MAPK8P45983 427 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 CLCN5P51795 746 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 DGKEP52429 567 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 BASP1P80723 227 aaKnown RBP15.87■□□□□ 0.13
DDX55-203ENST00000421670 RAD51Q06609 339 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 BCL2L1Q07817 233 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 TRAF2Q12933 501 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 PARP6Q2NL67 630 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 RALGPS1Q5JS13 557 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 KDELC2Q7Z4H8 507 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 DSG4Q86SJ6 1040 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 TMEM105Q8N8V8 129 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 PDCD6IPQ8WUM4 868 aaKnown RBP15.87■□□□□ 0.13
DDX55-203ENST00000421670 HMGB4Q8WW32 186 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 CPEB1Q9BZB8 566 aaKnown RBP15.87■□□□□ 0.13
DDX55-203ENST00000421670 ETNK1Q9HBU6 452 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 PPM1HQ9ULR3 514 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 MYO15AQ9UKN7 3530 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 NUMA1Q14980 2115 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 LRRK1Q38SD2 2015 aa15.87■□□□□ 0.13
DDX55-203ENST00000421670 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.87■□□□□ 0.13
DDX55-203ENST00000421670 PRNPP04156 253 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms