RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 POP4O95707 220 aaKnown RBP17.55■□□□□ 0.4
PTCD1-202ENST00000419981 CSF2P04141 144 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 CALB1P05937 261 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 UGT2B4P06133 528 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 GP1BAP07359 652 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 NME1P15531 152 aaKnown RBP17.55■□□□□ 0.4
PTCD1-202ENST00000419981 ACTN2P35609 894 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 SYCP1Q15431 976 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 LEKR1Q6ZMV7 388 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 C3orf20Q8ND61 904 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 ASB12Q8WXK4 309 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 FGF11Q92914 225 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 PCMTD1Q96MG8 357 aaPredicted RBP17.55■□□□□ 0.4
PTCD1-202ENST00000419981 KLHL32Q96NJ5 620 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 DEPDC7Q96QD5 511 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 PCDHB18PQ96TA0 734 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 KLF6Q99612 283 aaPredicted RBP17.55■□□□□ 0.4
PTCD1-202ENST00000419981 SIK3Q9Y2K2 1263 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 BPTFQ12830 3046 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 FASNP49327 2511 aaKnown RBP17.54■□□□□ 0.4
PTCD1-202ENST00000419981 LY6G6EA0A0G2JKS1 128 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 MYF5P13349 255 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 RFC1P35251 1148 aaPredicted RBP17.54■□□□□ 0.4
PTCD1-202ENST00000419981 RAD51Q06609 339 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 CLEC16AQ2KHT3 1053 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 MYLK3Q32MK0 819 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 TBC1D25Q3MII6 688 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 EFHC2Q5JST6 749 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 ATXN7L2Q5T6C5 722 aaPredicted RBP17.54■□□□□ 0.4
PTCD1-202ENST00000419981 CDCP2Q5VXM1 449 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 ZCCHC8Q6NZY4 707 aaKnown RBP17.54■□□□□ 0.4
PTCD1-202ENST00000419981 WDR59Q6PJI9 974 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 SLFN11Q7Z7L1 901 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 PHF13Q86YI8 300 aaPredicted RBP17.54■□□□□ 0.4
PTCD1-202ENST00000419981 ANKRD20A12PQ8NF67 263 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 NEK11Q8NG66 645 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 GDAP1L1Q96MZ0 367 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 LMBRD1Q9NUN5 540 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 SEPT11Q9NVA2 429 aaKnown RBP17.54■□□□□ 0.4
PTCD1-202ENST00000419981 FANCLQ9NW38 375 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 PCDHB1Q9Y5F3 818 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 CSNK1G3Q9Y6M4 447 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 U3KQA8 63 aa17.54■□□□□ 0.4
PTCD1-202ENST00000419981 AQP9O43315 295 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 BUB1O43683 1085 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 TMCC1O94876 653 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 IGSF6O95976 241 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 JUNDP17535 347 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 EPHB2P29323 1055 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 COPB1P53618 953 aaKnown RBP17.53■□□□□ 0.4
PTCD1-202ENST00000419981 PFN3P60673 137 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 GDPD4Q6W3E5 623 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 PYROXD2Q8N2H3 581 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 RTL3Q8N8U3 475 aaKnown RBP17.53■□□□□ 0.4
PTCD1-202ENST00000419981 IFI44Q8TCB0 444 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 CASKIN2Q8WXE0 1202 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 UBL7Q96S82 380 aaPredicted RBP17.53■□□□□ 0.4
PTCD1-202ENST00000419981 ABCG4Q9H172 646 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 KLF15Q9UIH9 416 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 SCN8AQ9UQD0 1980 aa17.53■□□□□ 0.4
PTCD1-202ENST00000419981 ANKRD62A6NC57 917 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 SIGLEC16A6NMB1 481 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 AREL1O15033 823 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 SPINT1O43278 529 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 CCP110O43303 1012 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 THOP1P52888 689 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 RHOAP61586 193 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 EIF2B5Q13144 721 aaKnown RBP17.52■□□□□ 0.4
PTCD1-202ENST00000419981 PTK2BQ14289 1009 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 LRRC73Q5JTD7 316 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 TPRG1LQ5T0D9 272 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 DNAJC24Q6P3W2 148 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 SCYL2Q6P3W7 929 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 RBM43Q6ZSC3 357 aaKnown RBP17.52■□□□□ 0.4
PTCD1-202ENST00000419981 MON1BQ7L1V2 547 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 TTC7BQ86TV6 843 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 VPS36Q86VN1 386 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 MAPK15Q8TD08 544 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 LMX1AQ8TE12 382 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 BTN2A2Q8WVV5 523 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 VOPP1Q96AW1 172 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 EPAS1Q99814 870 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 C1QTNF7Q9BXJ2 289 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 TTYH3Q9C0H2 523 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 PRORYQ9H606 182 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 NOL6Q9H6R4 1146 aaKnown RBP17.52■□□□□ 0.4
PTCD1-202ENST00000419981 NCKIPSDQ9NZQ3 722 aa17.52■□□□□ 0.4
PTCD1-202ENST00000419981 ARHGEF17Q96PE2 2063 aaPredicted RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 LGALS16A8MUM7 142 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 RIOK3O14730 519 aaKnown RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 CREB3O43889 395 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 CSO75390 466 aaKnown RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 TM7SF2O76062 418 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 IGFALSP35858 605 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 ZNF143P52747 638 aaPredicted RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 YBEYP58557 167 aaPredicted RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
PTCD1-202ENST00000419981 CCDC173Q0VFZ6 552 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 CDKN3Q16667 212 aa17.51■□□□□ 0.39
PTCD1-202ENST00000419981 DEFB133Q30KQ1 61 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms