RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 IL2P60568 153 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 HORMAD1Q86X24 394 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 BBS7Q8IWZ6 715 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 C1orf127Q8N9H9 656 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 BTN2A2Q8WVV5 523 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 MS4A4AQ96JQ5 239 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 COPS8Q99627 209 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 KLHL28Q9NXS3 571 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 A0A1B0GW55 424 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 APOA1P02647 267 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 DUX4L2P0CJ85 424 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 DUX4L3P0CJ86 424 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 DUX4L4P0CJ87 422 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 DUX4L5P0CJ88 424 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 DUX4L6P0CJ89 424 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 DUX4L7P0CJ90 424 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 TCF3P15923 654 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 LSP1P33241 339 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 NEK3P51956 506 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 DLG2Q15700 870 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 RBM43Q6ZSC3 357 aaKnown RBP17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 AVL9Q8NBF6 648 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 B4GALNT2Q8NHY0 566 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 SMARCD2Q92925 531 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 ABTB1Q969K4 478 aaPredicted RBP17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 OPTCQ9UBM4 332 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 DUX4Q9UBX2 424 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 TMEM114B3SHH9 223 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZNF185O15231 689 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 FFAR2O15552 330 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 AP5Z1O43299 807 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 GLRA3O75311 464 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 PMS1P54277 932 aaKnown RBP17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 TAS2R50P59544 299 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 MGAT5Q09328 741 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 LRRC26Q2I0M4 334 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 C11orf63Q6NUN7 778 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 FBXO39Q8N4B4 442 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 ICA1LQ8NDH6 482 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 NUS1Q96E22 293 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 RPL10LQ96L21 214 aaKnown RBP17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 SH3BP4Q9P0V3 963 aa17.09■□□□□ 0.33
SYNGAP1-202ENST00000418600 GLYATL1P3A0A0U1RQE8 302 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 NEK2P51955 445 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 CDK18Q07002 472 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 CUL3Q13618 768 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 DMC1Q14565 340 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 PLEKHG6Q3KR16 790 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 TEX9Q8N6V9 391 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 KLHL5Q96PQ7 755 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 FAM124BQ9H5Z6 455 aaPredicted RBP17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 GJB5O95377 273 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 MPOP05164 745 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 HPCAL1P37235 193 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 POLE2P56282 527 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 GNA12Q03113 381 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 NAA30Q147X3 362 aaPredicted RBP17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 CCNG2Q16589 344 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 PCID2Q5JVF3 399 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 PSTKQ8IV42 348 aaKnown RBP17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 LGMNQ99538 433 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 CNTN3Q9P232 1028 aa17.08■□□□□ 0.33
SYNGAP1-202ENST00000418600 HEPACAM2A8MVW5 462 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 BUD23O43709 281 aaKnown RBP17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 ALADP13716 330 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 GOT1P17174 413 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 PON2Q15165 354 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 CYP4Z1Q86W10 505 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 ZSWIM2Q8NEG5 633 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 SMG9Q9H0W8 520 aaKnown RBP17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 GID8Q9NWU2 228 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 PEX12O00623 359 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 RPL21P46778 160 aaKnown RBP17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 AVPR1BP47901 424 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 SCARA3Q6AZY7 606 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 LCLAT1Q6UWP7 414 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 ACTL9Q8TC94 416 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 DQX1Q8TE96 717 aaKnown RBP17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 RSPH9Q9H1X1 276 aaPredicted RBP17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 PIH1D1Q9NWS0 290 aaKnown RBP17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 C16orf96A6NNT2 1141 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 KCNU1A8MYU2 1149 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 KDELR1P24390 212 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 CMPK1P30085 196 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 HTR7P34969 479 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 MAGOHP61326 146 aaKnown RBP17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 PPP2R2AP63151 447 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 JAG1P78504 1218 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 ECM1Q16610 540 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 RNF19BQ6ZMZ0 732 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 MILR1Q7Z6M3 343 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 LCN9Q8WX39 176 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 PACSIN1Q9BY11 444 aa17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 MRPL1Q9BYD6 325 aaKnown RBP17.08■□□□□ 0.32
SYNGAP1-202ENST00000418600 LRRC14BA6NHZ5 514 aa17.07■□□□□ 0.32
SYNGAP1-202ENST00000418600 CRABP2P29373 138 aa17.07■□□□□ 0.32
SYNGAP1-202ENST00000418600 GRTP1Q5TC63 336 aa17.07■□□□□ 0.32
SYNGAP1-202ENST00000418600 ICE2Q659A1 982 aa17.07■□□□□ 0.32
SYNGAP1-202ENST00000418600 PLEKHM3Q6ZWE6 761 aa17.07■□□□□ 0.32
SYNGAP1-202ENST00000418600 CHST15Q7LFX5 561 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms