RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 EI24O14681 340 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 GUCY1B2O75343 617 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 BCAS1O75363 584 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 GH2P01242 217 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 C2P06681 752 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 SFNP31947 248 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ARCN1P48444 511 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 PLA2G16P53816 162 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 MYL6P60660 151 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 DLG2Q15700 870 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 SLFN12LQ6IEE8 588 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 UGT3A1Q6NUS8 523 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 HACD2Q6Y1H2 254 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 AQP12AQ8IXF9 295 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 PEX5LQ8IYB4 626 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 TMEM151AQ8N4L1 468 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 KDM1BQ8NB78 822 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 MCPH1Q8NEM0 835 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 URGCPQ8TCY9 931 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ATXN7L3BQ96GX2 97 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ZNF486Q96H40 463 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 FAR2Q96K12 515 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ZBTB45Q96K62 511 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 DNAI2Q9GZS0 605 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 PDLIM7Q9NR12 457 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 MTRRQ9UBK8 725 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 KLQ9UEF7 1012 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 VWA7Q9Y334 891 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 DGKBQ9Y6T7 804 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ILVBLA1L0T0 632 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 TRPC5OSA6NMA1 111 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 MED7O43513 233 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 SYNCRIPO60506 623 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 CABYRO75952 493 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 CD19P15391 556 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 GPD1P21695 349 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 IL10P22301 178 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 EEF1B2P24534 225 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 BMPR1AP36894 532 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 CACNB3P54284 484 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 CBX2Q14781 532 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 KIAA0408Q6ZU52 694 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 PIWIL3Q7Z3Z3 882 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 AKAP14Q86UN6 197 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 IQCF2Q8IXL9 164 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 CMTR2Q8IYT2 770 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 Q8N9G6 341 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 GOLM1Q8NBJ4 401 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ADPGKQ9BRR6 497 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 CAB39LQ9H9S4 337 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 TCEAL9Q9UHQ7 104 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 MRASO14807 208 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ABCB7O75027 752 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 SRP72O76094 671 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 TOMM70O94826 608 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 POLBP06746 335 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 SBK3P0C264 359 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 SLC7A2P52569 658 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ADARB1P78563 741 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 FASTKQ14296 549 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 INPP5AQ14642 412 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 PLCL1Q15111 1095 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 FAM102AQ5T9C2 384 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 TRNP1Q6NT89 227 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 SLC16A12Q6ZSM3 486 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 STRA8Q7Z7C7 330 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ERO1BQ86YB8 467 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 GALNT13Q8IUC8 556 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 MFSD4AQ8N468 514 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 ZFP90Q8TF47 636 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 MSTO1Q9BUK6 570 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 TP63Q9H3D4 680 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 TBC1D13Q9NVG8 400 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 PIH1D1Q9NWS0 290 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 CENPBD1B2RD01 187 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SLC22A1O15245 554 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 B4GAT1O43505 415 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 CAPN15O75808 1086 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 DGAT1O75907 488 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 PIGRP01833 764 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SNRPB2P08579 225 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 CHRNB1P11230 501 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 HDCP19113 662 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 PSMA4P25789 261 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 GSTM2P28161 218 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 MZF1P28698 734 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 RPS9P46781 194 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 AP3M2P53677 418 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 IGBP1P78318 339 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 CDC20Q12834 499 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SQLEQ14534 574 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 C15orf59Q2T9L4 293 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 BOLA3Q53S33 107 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SLX4IPQ5VYV7 408 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 TTC23LQ6PF05 361 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 CRTC3Q6UUV7 619 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 LDHDQ86WU2 507 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 DDIASQ8IXT1 998 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms