RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 NDFIP2Q9NV92 336 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 DUS2Q9NX74 493 aaKnown RBP13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 OGFRQ9NZT2 677 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 CFAP97Q9P2B7 532 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 EBF1Q9UH73 591 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 RSPH14Q9UHP6 348 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 IPO11Q9UI26 975 aaKnown RBP13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 TRHDEQ9UKU6 1024 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 AGO1Q9UL18 857 aaKnown RBP13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 ZNF510Q9Y2H8 683 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 WNT6Q9Y6F9 365 aa13.4□□□□□ -0.26
HLA-DMB-258ENST00000418107 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 TCRBV7S3A2A0A539 114 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 LNP1A1A4G5 178 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 GOLGA6CA6NDK9 693 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 SOBPA7XYQ1 873 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 SCAMP3O14828 347 aaKnown RBP13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 TP73O15350 636 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 METTL18O95568 372 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 ACSL3O95573 720 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 LATS1O95835 1130 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 KLKB1P03952 638 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 GOLGA6DP0CG33 693 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 PSMB4P28070 264 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 IFNAR2P48551 515 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 DGKEP52429 567 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 CDH4P55283 916 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 SLC7A9P82251 487 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 WASHC5Q12768 1159 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 FOXC1Q12948 553 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZNF177Q13360 481 aaPredicted RBP13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 KCNJ11Q14654 390 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZNF77Q15935 545 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 UAP1Q16222 522 aaPredicted RBP13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 PARP6Q2NL67 630 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 TEX44Q53QW1 395 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 FAM133BQ5BKY9 247 aaKnown RBP13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 HP1BP3Q5SSJ5 553 aaPredicted RBP13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 LRIG3Q6UXM1 1119 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 UNQ6494/PRO21346Q6UXR6 183 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 ARHGAP36Q6ZRI8 547 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 KRT222Q8N1A0 295 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 UMODL1-AS1Q8N2C9 162 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 UHMK1Q8TAS1 419 aaKnown RBP13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 OSCP1Q8WVF1 389 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 WBP2Q969T9 261 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 HMCESQ96FZ2 354 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 FRMD8Q9BZ67 464 aaPredicted RBP13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 CDC42EP4Q9H3Q1 356 aaKnown RBP13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 CENPHQ9H3R5 247 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 RETREG1Q9H6L5 497 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 GOLGA6AQ9NYA3 693 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
HLA-DMB-258ENST00000418107 ATRXP46100 2492 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZZEF1O43149 2961 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 SPEGQ15772 3267 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 MATN3O15232 486 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 EIF3HO15372 352 aaKnown RBP eCLIP13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 CLDN11O75508 207 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 TMEM63AO94886 807 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 RHOCP08134 193 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 CCNB1P14635 433 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 SPINK2P20155 84 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 TPSB2P20231 275 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 EIF3BP55884 814 aaKnown RBP13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 YBEYP58557 167 aaPredicted RBP13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 RPS24P62847 133 aaKnown RBP13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 USP4Q13107 963 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 SLC29A2Q14542 456 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 TPSAB1Q15661 275 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 KYNUQ16719 465 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 EML3Q32P44 896 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 PARP15Q460N3 678 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 CEP85LQ5SZL2 805 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 TTC39BQ5VTQ0 682 aaPredicted RBP13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 AFMIDQ63HM1 303 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 CCDC117Q8IWD4 279 aaPredicted RBP13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZBED8Q8IZ13 594 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 IQCKQ8N0W5 287 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 TSTD1Q8NFU3 115 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 TMA16Q96EY4 203 aaKnown RBP13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 C9orf72Q96LT7 481 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 TTC25Q96NG3 672 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 TPSD1Q9BZJ3 242 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZMIZ1Q9ULJ6 1067 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 MYOFQ9NZM1 2061 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZFYVE26Q68DK2 2539 aa13.38□□□□□ -0.27
HLA-DMB-258ENST00000418107 PATE3B3GLJ2 98 aa13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZBTB24O43167 697 aaPredicted RBP13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 RIPK2O43353 540 aa13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 MAFKO60675 156 aa13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 TBL1XO60907 577 aa13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 TTC4O95801 387 aa13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 OLFM2O95897 454 aa13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 GAD2Q05329 585 aa13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZBTB17Q13105 803 aa13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 SEMA5AQ13591 1074 aa13.37□□□□□ -0.27
HLA-DMB-258ENST00000418107 C5orf22Q49AR2 442 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms