RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 GNA12Q03113 381 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 EIF3IQ13347 325 aaKnown RBP16.6■□□□□ 0.25
PRPF18-203ENST00000417658 MORC3Q14149 939 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 ZSCAN23Q3MJ62 389 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 ZNF805Q5CZA5 627 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 PRRT3Q5FWE3 981 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 ESRP1Q6NXG1 681 aaKnown RBP16.6■□□□□ 0.25
PRPF18-203ENST00000417658 CRTC1Q6UUV9 634 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 PHACTR4Q8IZ21 702 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 CCDC3Q9BQI4 270 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 SLC13A1Q9BZW2 595 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 ACSL6Q9UKU0 697 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 CTNND2Q9UQB3 1225 aa16.6■□□□□ 0.25
PRPF18-203ENST00000417658 PLD2O14939 933 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 SRGAP2O75044 1071 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 ETFBP38117 255 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 STX17P56962 302 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 PAK1Q13153 545 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 LVRNQ6Q4G3 990 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 GBP6Q6ZN66 633 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 RBFAQ8N0V3 343 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 TBCBQ99426 244 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 ANP32EQ9BTT0 268 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 LRRC61Q9BV99 259 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 ZYG11BQ9C0D3 744 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 TCEAL2Q9H3H9 227 aaPredicted RBP16.59■□□□□ 0.25
PRPF18-203ENST00000417658 RETREG1Q9H6L5 497 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 ZDHHC6Q9H6R6 413 aa16.59■□□□□ 0.25
PRPF18-203ENST00000417658 PPARGC1AQ9UBK2 798 aaKnown RBP16.59■□□□□ 0.25
PRPF18-203ENST00000417658 FCF1Q9Y324 198 aaKnown RBP16.59■□□□□ 0.25
PRPF18-203ENST00000417658 GTPBP10A4D1E9 387 aaKnown RBP16.58■□□□□ 0.24
PRPF18-203ENST00000417658 PYCARD-AS1I3L0S3 204 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 AREL1O15033 823 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 GJB6O95452 261 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 CD160O95971 181 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 TSHRP16473 764 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 ABL2P42684 1182 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 GABRB2P47870 512 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 BLKP51451 505 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 GEMIN4P57678 1058 aaKnown RBP16.58■□□□□ 0.24
PRPF18-203ENST00000417658 C1orf61Q13536 156 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 DRAP1Q14919 205 aaPredicted RBP16.58■□□□□ 0.24
PRPF18-203ENST00000417658 EXOC3L4Q17RC7 722 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 FAXCQ5TGI0 409 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 SDR16C5Q8N3Y7 309 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 EXD3Q8N9H8 876 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 SCG3Q8WXD2 468 aaKnown RBP16.58■□□□□ 0.24
PRPF18-203ENST00000417658 C1QTNF7Q9BXJ2 289 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 OSBPL1AQ9BXW6 950 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 FAM117AQ9C073 453 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 CLPBQ9H078 707 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 TMPRSS4Q9NRS4 437 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 IL17BQ9UHF5 180 aa16.58■□□□□ 0.24
PRPF18-203ENST00000417658 PNMA8BQ9ULN7 279 aaPredicted RBP16.58■□□□□ 0.24
PRPF18-203ENST00000417658 POP4O95707 220 aaKnown RBP16.57■□□□□ 0.24
PRPF18-203ENST00000417658 ITGB2P05107 769 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 PON1P27169 355 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 SLC5A2P31639 672 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 CDH5P33151 784 aaPredicted RBP16.57■□□□□ 0.24
PRPF18-203ENST00000417658 CLCN1P35523 988 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 INHBCP55103 352 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 BPIFB4P59827 614 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 APBA1Q02410 837 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 PPARDQ03181 441 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 MACC1Q6ZN28 852 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 PRICKLE2Q7Z3G6 844 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 BNIPLQ7Z465 357 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 SLC47A2Q86VL8 602 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 FSTL5Q8N475 847 aaPredicted RBP16.57■□□□□ 0.24
PRPF18-203ENST00000417658 FBXO39Q8N4B4 442 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 ARL10Q8N8L6 244 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 TMEM35BQ8NCS4 154 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 VOPP1Q96AW1 172 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 C18orf8Q96DM3 657 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 TM6SF2Q9BZW4 377 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 STRADBQ9C0K7 418 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 GGT7Q9UJ14 662 aa16.57■□□□□ 0.24
PRPF18-203ENST00000417658 HEMK1Q9Y5R4 338 aaPredicted RBP16.57■□□□□ 0.24
PRPF18-203ENST00000417658 FOXN3O00409 490 aaPredicted RBP16.56■□□□□ 0.24
PRPF18-203ENST00000417658 CASC3O15234 703 aaKnown RBP16.56■□□□□ 0.24
PRPF18-203ENST00000417658 NOBOXO60393 691 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 TM7SF2O76062 418 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 GSRP00390 522 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 SFTPCP11686 197 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 UGT1A5P35504 534 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 IGFALSP35858 605 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 EIF4A3P38919 411 aaKnown RBP16.56■□□□□ 0.24
PRPF18-203ENST00000417658 PEX5P50542 639 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 SNRPD1P62314 119 aaKnown RBP16.56■□□□□ 0.24
PRPF18-203ENST00000417658 C1QBPQ07021 282 aaKnown RBP16.56■□□□□ 0.24
PRPF18-203ENST00000417658 NFATC3Q12968 1075 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 POLD3Q15054 466 aaPredicted RBP16.56■□□□□ 0.24
PRPF18-203ENST00000417658 ELOCQ15369 112 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 MYLK3Q32MK0 819 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 LINC00303Q3SY05 128 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 USP53Q70EK8 1073 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 RAB11FIP2Q7L804 512 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 ARCQ7LC44 396 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 TTC7BQ86TV6 843 aa16.56■□□□□ 0.24
PRPF18-203ENST00000417658 VPS36Q86VN1 386 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms