RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 TBC1D3CQ6IPX1 549 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 NAPEPLDQ6IQ20 393 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 PPP1R2P3Q6NXS1 205 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TRIM69Q86WT6 500 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TBC1D3Q8IZP1 549 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TMEM145Q8NBT3 493 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TSEN2Q8NCE0 465 aaKnown RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 OR13H1Q8NG92 308 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 BAHD1Q8TBE0 780 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 CCDC114Q96M63 670 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 GDAP1L1Q96MZ0 367 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 SMIM14Q96QK8 99 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 HEPHQ9BQS7 1158 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 WRAP53Q9BUR4 548 aaKnown RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 PCED1AQ9H1Q7 454 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 DEF6Q9H4E7 631 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 NHEJ1Q9H9Q4 299 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 SP110Q9HB58 689 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 MRPL47Q9HD33 250 aaKnown RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TM7SF3Q9NS93 570 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 PNMA8BQ9ULN7 279 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 A0A0U1RQS6 177 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 SSU72P8A0A1W2PR75 194 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 C16orf96A6NNT2 1141 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 H3BRJ5 948 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 SLC7A4O43246 635 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 HYAL3O43820 417 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 FOXD2O60548 495 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 BUB1BO60566 1050 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 CBFA2T3O75081 653 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 RNF8O76064 485 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 PROSCO94903 275 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 CER1O95813 267 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 TPM3P06753 285 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 SYPP08247 313 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 TMEM253P0C7T8 217 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 IL4RP24394 825 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 EPHA8P29322 1005 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 DPP6P42658 865 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 RECQLP46063 649 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 CCR5P51681 352 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 RACK1P63244 317 aaKnown RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 KRT81Q14533 505 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 TCEA2Q15560 299 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 ZNF423Q2M1K9 1284 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 ACBD5Q5T8D3 534 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 FAM46CQ5VWP2 391 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 B4GALNT4Q76KP1 1039 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 PTAR1Q7Z6K3 402 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 RABEPKQ7Z6M1 372 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 VPS36Q86VN1 386 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 HORMAD1Q86X24 394 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 PNPLA1Q8N8W4 532 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 ACRBPQ8NEB7 543 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 TMIEQ8NEW7 156 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 OR8K1Q8NGG5 319 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 FUBP1Q96AE4 644 aaKnown RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 IQCDQ96DY2 449 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 HDAC8Q9BY41 377 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 TRIM5Q9C035 493 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 BRD8Q9H0E9 1235 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 PREBQ9HCU5 417 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 DYRK4Q9NR20 520 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 TOR4AQ9NXH8 423 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 KLK13Q9UKR3 277 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 PCOLCE2Q9UKZ9 415 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 WASF3Q9UPY6 502 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 REXO2Q9Y3B8 237 aaKnown RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 BZW2Q9Y6E2 419 aaKnown RBP10.36□□□□□ -0.75
HDLBP-206ENST00000417540 CHD6Q8TD26 2715 aa10.36□□□□□ -0.75
HDLBP-206ENST00000417540 SMG1Q96Q15 3661 aaKnown RBP10.35□□□□□ -0.75
HDLBP-206ENST00000417540 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 GOLGA8CPA6NN73 597 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 AKR1B15C9JRZ8 316 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-206ENST00000417540 DAPK3O43293 454 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 AKR1B10O60218 316 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 PCDH8O95206 1070 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 TNNT1P13805 278 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 CD38P28907 300 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 SNRPD1P62314 119 aaKnown RBP10.35□□□□□ -0.75
HDLBP-206ENST00000417540 SIM1P81133 766 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-206ENST00000417540 GBE1Q04446 702 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 SLC10A7Q0GE19 358 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 RALGDSQ12967 914 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 IHHQ14623 411 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 MESDQ14696 234 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 LLGL1Q15334 1064 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 NPNTQ6UXI9 565 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 CAMK1DQ8IU85 385 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 PELI3Q8N2H9 469 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 ATPAF2Q8N5M1 289 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 PQLC3Q8N755 202 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 PCDH19Q8TAB3 1148 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 TEKT4Q8WW24 435 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 CTNNBL1Q8WYA6 563 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-206ENST00000417540 RAPGEF5Q92565 580 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 ISG20Q96AZ6 181 aaKnown RBP10.35□□□□□ -0.75
HDLBP-206ENST00000417540 PPP1R16AQ96I34 528 aa10.35□□□□□ -0.75
HDLBP-206ENST00000417540 NCAPGQ9BPX3 1015 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms