RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 PCSK1NQ9UHG2 260 aa18.14■□□□□ 0.49
CPNE1-210ENST00000416778 DSPP15924 2871 aaKnown RBP18.14■□□□□ 0.49
CPNE1-210ENST00000416778 POM121BA6NF01 834 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 TRIM38O00635 465 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 AREL1O15033 823 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 FGF10O15520 208 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-210ENST00000416778 SPINT1O43278 529 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 ATMINO43313 823 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-210ENST00000416778 UGT2B4P06133 528 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 TIMP2P16035 220 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 DGKAP23743 735 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 PBX1P40424 430 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 CAMK2BQ13554 666 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 KLHL40Q2TBA0 621 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 CYP4V2Q6ZWL3 525 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-210ENST00000416778 ZNF354CQ86Y25 554 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 DCP2Q8IU60 420 aaKnown RBP18.13■□□□□ 0.49
CPNE1-210ENST00000416778 SLC22A18ASQ8N1D0 253 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 FNIP1Q8TF40 1166 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 PEBP4Q96S96 227 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 OSBPL1AQ9BXW6 950 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 CPEB1Q9BZB8 566 aaKnown RBP18.13■□□□□ 0.49
CPNE1-210ENST00000416778 SLC39A8Q9C0K1 460 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 GPR27Q9NS67 375 aa18.13■□□□□ 0.49
CPNE1-210ENST00000416778 CNOT8Q9UFF9 292 aaKnown RBP18.13■□□□□ 0.49
CPNE1-210ENST00000416778 SYCE3A1L190 88 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 TRABD2BA6NFA1 517 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 EIF3CLB5ME19 914 aaKnown RBP18.12■□□□□ 0.49
CPNE1-210ENST00000416778 J3KR12 359 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 INSIG1O15503 277 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 SDC3O75056 442 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 CDK4P11802 303 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 DESP17661 470 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 ITIH2P19823 946 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 MIPP30301 263 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 NDST2P52849 883 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 FANCCQ00597 558 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 RAD51Q06609 339 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 SGCGQ13326 291 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 HGSNATQ68CP4 663 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 LUZP1Q86V48 1076 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 ZSCAN30Q86W11 494 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 TMPRSS12Q86WS5 348 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 IFT43Q96FT9 208 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 GDAP1L1Q96MZ0 367 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 EIF3CQ99613 913 aaKnown RBP18.12■□□□□ 0.49
CPNE1-210ENST00000416778 DHX35Q9H5Z1 703 aaKnown RBP18.12■□□□□ 0.49
CPNE1-210ENST00000416778 UCKL1Q9NWZ5 548 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 DONSONQ9NYP3 566 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 GGT7Q9UJ14 662 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 AP4E1Q9UPM8 1137 aa18.12■□□□□ 0.49
CPNE1-210ENST00000416778 GOLGA4Q13439 2230 aaKnown RBP18.12■□□□□ 0.49
CPNE1-210ENST00000416778 ANKRD11Q6UB99 2663 aaPredicted RBP18.12■□□□□ 0.49
CPNE1-210ENST00000416778 FAM149AA5PLN7 773 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 RNF8O76064 485 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 GIMD1P0DJR0 217 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 CKMT2P17540 419 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 HCAR3P49019 387 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 ACADVLP49748 655 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 TPI1P60174 286 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 RHOAP61586 193 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 ZNF211Q13398 564 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-210ENST00000416778 PROX2Q3B8N5 592 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 AFMIDQ63HM1 303 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 PROSER1Q86XN7 944 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 PSTKQ8IV42 348 aaKnown RBP18.11■□□□□ 0.49
CPNE1-210ENST00000416778 SYN2Q92777 582 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-210ENST00000416778 CENPTQ96BT3 561 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 CELF6Q96J87 481 aaKnown RBP18.11■□□□□ 0.49
CPNE1-210ENST00000416778 KCTD15Q96SI1 283 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-210ENST00000416778 SNRNP25Q9BV90 132 aaKnown RBP18.11■□□□□ 0.49
CPNE1-210ENST00000416778 CALN1Q9BXU9 219 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 PDFQ9HBH1 243 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 DKK3Q9UBP4 350 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 LHX3Q9UBR4 397 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 ITM2BQ9Y287 266 aa18.11■□□□□ 0.49
CPNE1-210ENST00000416778 LAMA5O15230 3695 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 PKD1L2Q7Z442 2459 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 TRPM6Q9BX84 2022 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 PTPRBP23467 1997 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 A0A1W2PQJ5 194 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 A6NNZ2 444 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 EEF2KO00418 725 aaKnown RBP18.1■□□□□ 0.49
CPNE1-210ENST00000416778 NEMP1O14524 444 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 SIGLEC6O43699 453 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 BUB1BO60566 1050 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-210ENST00000416778 PRAMEF11O60813 436 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 ERCC2P18074 760 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 PAPOLAP51003 745 aaKnown RBP18.1■□□□□ 0.49
CPNE1-210ENST00000416778 UBASH3AP57075 661 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 FZD2Q14332 565 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 HCAR2Q8TDS4 363 aa18.1■□□□□ 0.49
CPNE1-210ENST00000416778 CCDC86Q9H6F5 360 aaKnown RBP18.1■□□□□ 0.49
CPNE1-210ENST00000416778 UBA2Q9UBT2 640 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-210ENST00000416778 BZW2Q9Y6E2 419 aaKnown RBP18.1■□□□□ 0.49
CPNE1-210ENST00000416778 SPTY2D1-AS1A0A0U1RR47 76 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 FPGTO14772 594 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 PRPSAP2O60256 369 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 MMP20O60882 483 aa18.09■□□□□ 0.49
CPNE1-210ENST00000416778 LRCH4O75427 683 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms