RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	HJURP	Q8NCD3	748 aa	Predicted RBP	8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	UBA3	Q8TBC4	463 aa		8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	OR8D1	Q8WZ84	308 aa		8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	ALG14	Q96F25	216 aa		8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	TCTN2	Q96GX1	697 aa		8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	LRRN3	Q9H3W5	708 aa		8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	SEPT10	Q9P0V9	454 aa		8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	CSNK1G3	Q9Y6M4	447 aa		8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	RNF215	Q9Y6U7	377 aa		8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	ESPL1	Q14674	2120 aa		8.84	□□□□□ -0.99
NIF3L1-206	ENST00000416651	APC	P25054	2843 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	SPTLC2	O15270	562 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	SMAD6	O43541	496 aa	Known RBP	8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	EXOC3	O60645	756 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	LATS1	O95835	1130 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	FYN	P06241	537 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	LCP1	P13796	627 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	CCKBR	P32239	447 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	NUDT1	P36639	197 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	RGS7	P49802	495 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	RAD23B	P54727	409 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	OXCT1	P55809	520 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	TBX4	P57082	545 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	PITX1	P78337	314 aa	Predicted RBP	8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	MRPL49	Q13405	166 aa	Known RBP	8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	DEFB109B	Q30KR1	87 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	PRR30	Q53SZ7	412 aa	Predicted RBP	8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	RNF219	Q5W0B1	726 aa	Predicted RBP	8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	KYAT3	Q6YP21	454 aa	Known RBP	8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	PARG	Q86W56	976 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	ATCAY	Q86WG3	371 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	ARHGAP18	Q8N392	663 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	RCBTB1	Q8NDN9	531 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	TAS1R2	Q8TE23	839 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	RNF139	Q8WU17	664 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	IFT43	Q96FT9	208 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	SLC17A9	Q9BYT1	436 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	CASS4	Q9NQ75	786 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	APOBEC3B	Q9UH17	382 aa	Known RBP	8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	KCND3	Q9UK17	655 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	TPX2	Q9ULW0	747 aa	Known RBP	8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	ITM2B	Q9Y287	266 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	HS3ST3A1	Q9Y663	406 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651	AKAP9	Q99996	3911 aa		8.83	□□□□□ -1
NIF3L1-206	ENST00000416651		A0A1W2PQ27	194 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651		A0A1W2PQ64	194 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651		A0A1W2PQC6	194 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	KPNA3	O00505	521 aa	Predicted RBP	8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	TPP1	O14773	563 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	MCF2L	O15068	1137 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	ATP9B	O43861	1147 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	SNAP91	O60641	907 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	TRIM49	P0CI25	452 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	TRIM49C	P0CI26	452 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	ZNF18	P17022	549 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	NOS2	P35228	1153 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	UGT1A3	P35503	534 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	PIK3CA	P42336	1068 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	DAOA	P59103	153 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	ARHGAP44	Q17R89	818 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	GOLGA7B	Q2TAP0	167 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	LACTB2	Q53H82	288 aa	Predicted RBP	8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	CXorf57	Q6NSI4	855 aa	Known RBP	8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	MSANTD2	Q6P1R3	559 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	MAMDC2	Q7Z304	686 aa	Predicted RBP	8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	SLITRK4	Q8IW52	837 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	PHACTR4	Q8IZ21	702 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	PCDH19	Q8TAB3	1148 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	SEMA4D	Q92854	862 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	STRADB	Q9C0K7	418 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	RDH14	Q9HBH5	336 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	SLC39A2	Q9NP94	309 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	IPO11	Q9UI26	975 aa	Known RBP	8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	TUBD1	Q9UJT1	453 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	MRPS18B	Q9Y676	258 aa	Known RBP	8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	CSMD2	Q7Z408	3487 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	MTOR	P42345	2549 aa		8.82	□□□□□ -1
NIF3L1-206	ENST00000416651	LOC101059948	A0A1B0GTJ6	334 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	IGLON5	A6NGN9	336 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	LMO7DN	F2Z398	122 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	ENDOD1	O94919	500 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	ANXA6	P08133	673 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	FGF3	P11487	239 aa	Predicted RBP	8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	ITIH2	P19823	946 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	TACR2	P21452	398 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	RRM1	P23921	792 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	STAT6	P42226	847 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	GCLM	P48507	274 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	SLC11A2	P49281	568 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	ZNF445	P59923	1031 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	PFN3	P60673	137 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	CEBPZ	Q03701	1054 aa	Known RBP	8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	PPP3CA	Q08209	521 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	KLRB1	Q12918	225 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	EIF3I	Q13347	325 aa	Known RBP	8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	FAM26F	Q5R3K3	315 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	PHF19	Q5T6S3	580 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	FAM46C	Q5VWP2	391 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	SLC9A9	Q8IVB4	645 aa		8.81	□□□□□ -1
NIF3L1-206	ENST00000416651	CCDC65	Q8IXS2	484 aa		8.81	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms