RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 WASF2Q9Y6W5 498 aa13.45□□□□□ -0.26
CNN3-203ENST00000415017 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 A0A1W2PQF6 199 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 TSPAN11A1L157 253 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 TTC24A2A3L6 582 aaPredicted RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 SMAPO00193 183 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 CTIFO43310 598 aaKnown RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 RNF40O75150 1001 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 SOCS5O75159 536 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 ANXA9O76027 345 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 HEXIM1O94992 359 aaKnown RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 AP2A1O95782 977 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 IGSF6O95976 241 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 PRLP01236 227 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 ITIH2P19823 946 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 TNFRSF8P28908 595 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 ACTN2P35609 894 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 RPS9P46781 194 aaKnown RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 CCNHP51946 323 aaPredicted RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 SLC7A5Q01650 507 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 SIGLEC14Q08ET2 396 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 MSLNQ13421 630 aaPredicted RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 GRM3Q14832 879 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 TRADDQ15628 312 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 FNDC3BQ53EP0 1204 aaKnown RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 ZDHHC24Q6UX98 284 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 SERPINA13PQ6UXR4 307 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 MAMSTRQ6ZN01 415 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 TRMT11Q7Z4G4 463 aaKnown RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 SIX5Q8N196 739 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 MCUQ8NE86 351 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 TMIEQ8NEW7 156 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 SPATA22Q8NHS9 363 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 HCAR2Q8TDS4 363 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 ART4Q93070 314 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 FAM131CQ96AQ9 280 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 SNF8Q96H20 258 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 EXOC2Q96KP1 924 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 FAM129AQ9BZQ8 928 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 MTG2Q9H4K7 406 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 RAB6BQ9NRW1 208 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 ZDHHC18Q9NUE0 388 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 CACNA2D2Q9NY47 1150 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 HECAQ9UBI9 543 aaPredicted RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 FAM153AQ9UHL3 310 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 PPM1HQ9ULR3 514 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 TPX2Q9ULW0 747 aaKnown RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 SLC8A2Q9UPR5 921 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 AAR2Q9Y312 384 aaKnown RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 UTP11Q9Y3A2 253 aaKnown RBP13.44□□□□□ -0.26
CNN3-203ENST00000415017 PPIL1Q9Y3C6 166 aa13.44□□□□□ -0.26
CNN3-203ENST00000415017 SCN8AQ9UQD0 1980 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 PLXND1Q9Y4D7 1925 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 TCRBV7S3A2A0A539 114 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 PSMD3O43242 534 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 SIN3BO75182 1162 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 MT-CYBP00156 380 aaPredicted RBP13.43□□□□□ -0.26
CNN3-203ENST00000415017 CTSLP07711 333 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 SERPINF2P08697 491 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 HLA-EP13747 358 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 ECHS1P30084 290 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 TIE1P35590 1138 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 ADCY8P40145 1251 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 CD86P42081 329 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 MAGEA3P43357 314 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 SCNN1BP51168 640 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 COPAP53621 1224 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 GEMP55040 296 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 TRAF2Q12933 501 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 LRRC32Q14392 662 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 GAS6Q14393 721 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 ELAVL3Q14576 367 aaKnown RBP13.43□□□□□ -0.26
CNN3-203ENST00000415017 MORF4L2Q15014 288 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 ANKRD22Q5VYY1 191 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 DENND5AQ6IQ26 1287 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 PKN3Q6P5Z2 889 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 ZNF534Q76KX8 674 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 PCGF5Q86SE9 256 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 PPIL6Q8IXY8 311 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 CHST14Q8NCH0 376 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 PJA1Q8NG27 643 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 PRCCQ92733 491 aaPredicted RBP13.43□□□□□ -0.26
CNN3-203ENST00000415017 FEM1CQ96JP0 617 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 ZNF641Q96N77 438 aaPredicted RBP13.43□□□□□ -0.26
CNN3-203ENST00000415017 RBM15Q96T37 977 aaKnown RBP eCLIP13.43□□□□□ -0.26
CNN3-203ENST00000415017 UHRF1Q96T88 793 aaPredicted RBP13.43□□□□□ -0.26
CNN3-203ENST00000415017 HEPHQ9BQS7 1158 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 TDRD1Q9BXT4 1180 aaKnown RBP13.43□□□□□ -0.26
CNN3-203ENST00000415017 TM6SF2Q9BZW4 377 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 RSPH9Q9H1X1 276 aaPredicted RBP13.43□□□□□ -0.26
CNN3-203ENST00000415017 TBC1D17Q9HA65 648 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 FBRSQ9HAH7 460 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 SCUBE2Q9NQ36 999 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 DLGAP2Q9P1A6 1054 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 ASIC3Q9UHC3 531 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 EVLQ9UI08 416 aaPredicted RBP13.43□□□□□ -0.26
CNN3-203ENST00000415017 FBXL21Q9UKT6 434 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 MMP17Q9ULZ9 603 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 SHOC2Q9UQ13 582 aa13.43□□□□□ -0.26
CNN3-203ENST00000415017 SNX24Q9Y343 169 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms