RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 NCEH1Q6PIU2 408 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.83□□□□□ -0.04
LIMS1-206ENST00000414829 ARHGAP36Q6ZRI8 547 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 BBS12Q6ZW61 710 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 TRIM69Q86WT6 500 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 CCDC13Q8IYE1 715 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 RGL4Q8IZJ4 473 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 TSEN2Q8NCE0 465 aaKnown RBP14.83□□□□□ -0.04
LIMS1-206ENST00000414829 OR6K2Q8NGY2 324 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 DNASE2BQ8WZ79 361 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 SNX19Q92543 992 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 MAML1Q92585 1016 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 KRT35Q92764 455 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 SKA1Q96BD8 255 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 CD93Q9NPY3 652 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 SERGEFQ9UGK8 458 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 EVLQ9UI08 416 aaPredicted RBP14.83□□□□□ -0.04
LIMS1-206ENST00000414829 PPP2R2CQ9Y2T4 447 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.83□□□□□ -0.04
LIMS1-206ENST00000414829 ACTL7AQ9Y615 435 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 CAPN6Q9Y6Q1 641 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 PIEZO1Q92508 2521 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 FAM47DPA6NHR8 397 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 HACD1B0YJ81 288 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 APOC4-APOC2K7ER74 178 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 FTCDO95954 541 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 PEX11BO96011 259 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 APOC2P02655 101 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 ZNF806P0C7X5 589 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 KRT10P13645 584 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 CCNB1P14635 433 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 CD27P26842 260 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 POLR2LP62875 67 aaKnown RBP14.82□□□□□ -0.04
LIMS1-206ENST00000414829 DYNLT1P63172 113 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 SLC10A7Q0GE19 358 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 ELP6Q0PNE2 266 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 CCDC173Q0VFZ6 552 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 DUOXA1Q1HG43 343 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 POM121L1PQ3SYA9 428 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 PIP5KL1Q5T9C9 394 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 DCAF12L1Q5VU92 463 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 KAZNQ674X7 775 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 KIAA1161Q6NSJ0 714 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 ERAP2Q6P179 960 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 ARMCX6Q7L4S7 300 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 SRLQ86TD4 932 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 TEX26Q8N6G2 289 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 FRMD1Q8N878 549 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 TTC13Q8NBP0 860 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 PIGKQ92643 395 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 HAUS1Q96CS2 278 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 EXOC2Q96KP1 924 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 OLFM3Q96PB7 478 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 NUDCD1Q96RS6 583 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 NUSAP1Q9BXS6 441 aaKnown RBP14.82□□□□□ -0.04
LIMS1-206ENST00000414829 OSBPL8Q9BZF1 889 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 ARRDC1-AS1Q9H2J1 176 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 SCUBE2Q9NQ36 999 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 LZTFL1Q9NQ48 299 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 PILRBQ9UKJ0 227 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 DMTF1Q9Y222 760 aa14.82□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3DA0A087WVF3 549 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3IA0A087WXS9 549 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3EA0A087X179 549 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3KA0A087X1G2 549 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 A0A1B0GTW7 788 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TSPAN11A1L157 253 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3FA6NER0 549 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 C16orf96A6NNT2 1141 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3LB9A6J9 549 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 NEMP1O14524 444 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 KHNYNO15037 678 aaKnown RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TSPAN6O43657 245 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 FSBPO95073 299 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3HP0C7X1 549 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 SDHBP21912 280 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 ITPKAP23677 461 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 MARCKSL1P49006 195 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 SCNN1BP51168 640 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 IFI35P80217 286 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 XRCC4Q13426 336 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TEAD4Q15561 434 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 SETMARQ53H47 684 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 SLC45A4Q5BKX6 768 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 PLA2G2CQ5R387 149 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 SEL1L2Q5TEA6 688 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3GQ6DHY5 549 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 ALG1LQ6GMV1 187 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3CQ6IPX1 549 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 PARS2Q7L3T8 475 aaKnown RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 PRPF39Q86UA1 669 aaKnown RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 ALYREFQ86V81 257 aaKnown RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 SLC41A1Q8IVJ1 513 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TP53INP2Q8IXH6 220 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TBC1D3Q8IZP1 549 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 TFB1MQ8WVM0 346 aaKnown RBP14.81□□□□□ -0.04
LIMS1-206ENST00000414829 SPOCK2Q92563 424 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 ARRDC3Q96B67 414 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 HES6Q96HZ4 224 aa14.81□□□□□ -0.04
LIMS1-206ENST00000414829 KLHL32Q96NJ5 620 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms