RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PLK1P53350 603 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 PPP2R2AP63151 447 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 SARNPP82979 210 aaKnown RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 CYTH1Q15438 398 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 SMAD2Q15796 467 aaKnown RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 PARP6Q2NL67 630 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 GKAP1Q5VSY0 366 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 RNF135Q8IUD6 432 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 PPIL6Q8IXY8 311 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 ARMC2Q8NEN0 867 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 SORCS1Q8WY21 1168 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 MLPHQ9BV36 600 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 C2orf49Q9BVC5 232 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 EBF2Q9HAK2 575 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 ATP8A1Q9Y2Q0 1164 aa15.75■□□□□ 0.11
SHMT2-202ENST00000414700 FCF1Q9Y324 198 aaKnown RBP15.75■□□□□ 0.11
SHMT2-202ENST00000414700 ANTXRLA6NF34 631 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 SMAD6O43541 496 aaKnown RBP15.74■□□□□ 0.11
SHMT2-202ENST00000414700 ASGR2P07307 311 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 SOX9P48436 509 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 CCNHP51946 323 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-202ENST00000414700 DSC2Q02487 901 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 SEMA5AQ13591 1074 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 NSMCE1Q8WV22 266 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 NSMCE3Q96MG7 304 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 FMO2Q99518 471 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 PHF7Q9BWX1 381 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-202ENST00000414700 KCNK12Q9HB15 430 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 GLOD4Q9HC38 313 aa15.74■□□□□ 0.11
SHMT2-202ENST00000414700 TMCC1O94876 653 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 IL9P15248 144 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 HSD17B3P37058 310 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 ITKQ08881 620 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 NIPAL4Q0D2K0 466 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 SPARCL1Q14515 664 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 ZNF235Q14590 738 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 MORF4L2Q15014 288 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 PTCRAQ6ISU1 281 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-202ENST00000414700 KIAA0907Q7Z7F0 614 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-202ENST00000414700 ACDQ96AP0 544 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 ZNF599Q96NL3 588 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 XPO6Q96QU8 1125 aaKnown RBP15.73■□□□□ 0.11
SHMT2-202ENST00000414700 RBM15Q96T37 977 aaKnown RBP eCLIP15.73■□□□□ 0.11
SHMT2-202ENST00000414700 BRD9Q9H8M2 597 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 PIH1D1Q9NWS0 290 aaKnown RBP15.73■□□□□ 0.11
SHMT2-202ENST00000414700 NFS1Q9Y697 457 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 USP12O75317 370 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 AVILO75366 819 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 BANF1O75531 89 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 MMP2P08253 660 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 GSTA1P08263 222 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 RPSAP08865 295 aaKnown RBP15.73■□□□□ 0.11
SHMT2-202ENST00000414700 OPRD1P41143 372 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 KDSRQ06136 332 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 RIPK1Q13546 671 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 SLC12A1Q13621 1099 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 SLMAPQ14BN4 828 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 LEXMQ3ZCV2 418 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 ITPRIPL1Q6GPH6 555 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 PRPF39Q86UA1 669 aaKnown RBP15.73■□□□□ 0.11
SHMT2-202ENST00000414700 CPA6Q8N4T0 437 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 CYB5D2Q8WUJ1 264 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 PSKH2Q96QS6 385 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 SLC2A11Q9BYW1 496 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 SHOC2Q9UQ13 582 aa15.73■□□□□ 0.11
SHMT2-202ENST00000414700 PRRT4C9JH25 899 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 FDFT1P37268 417 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 MAGEA6P43360 314 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 ZNF844Q08AG5 666 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 ACCSLQ4AC99 568 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 UBAP2Q5T6F2 1119 aaKnown RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 MBLAC2Q68D91 279 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 KCTD11Q693B1 232 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 C4orf22Q6V702 233 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 ZNF534Q76KX8 674 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 PCGF5Q86SE9 256 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 CCDC25Q86WR0 208 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 BBOF1Q8ND07 529 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 ARRDC2Q8TBH0 407 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 NXPE3Q969Y0 559 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 FCRL5Q96RD9 977 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 SEMA3CQ99985 751 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 CINPQ9BW66 212 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 FBRSL1Q9HCM7 1045 aaKnown RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 SEPT3Q9UH03 358 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 SLCO3A1Q9UIG8 710 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 ZNF821O75541 412 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 ZNF189O75820 626 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 DRD4P21917 467 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 GCKP35557 465 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 CD86P42081 329 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 SERPINH1P50454 418 aaKnown RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 BIRC2Q13490 618 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 ITPRIPL2Q3MIP1 535 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 MSS51Q4VC12 460 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 HP1BP3Q5SSJ5 553 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-202ENST00000414700 FNBP1LQ5T0N5 605 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 IER5LQ5T953 404 aa15.72■□□□□ 0.11
SHMT2-202ENST00000414700 RETSATQ6NUM9 610 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms