RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SERPINA4P29622 427 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 ACVRL1P37023 503 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 CETN2P41208 172 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 CTSKP43235 329 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 GRK6P43250 576 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 MAGEA1P43355 309 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 RABIFP47224 123 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 NR2C2P49116 596 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 CSNK1EP49674 416 aaKnown RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 CCT8P50990 548 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PAPOLAP51003 745 aaKnown RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 DNA2P51530 1060 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 IRAK1P51617 712 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 RPL26P61254 145 aaKnown RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 BCL2L1Q07817 233 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 ZNF252P-AS1Q0IIN9 211 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 GRIK2Q13002 908 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 ILKQ13418 452 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PEX6Q13608 980 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 DPYSQ14117 519 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PAFAH1B3Q15102 231 aaKnown RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 HLA-BQ31612 363 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 TMEM52BQ4KMG9 183 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 HS1BP3Q53T59 392 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PPM1JQ5JR12 505 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PIP5KL1Q5T9C9 394 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 MARC1Q5VT66 337 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 ERAP2Q6P179 960 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 LINGO4Q6UY18 593 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 CYP4V2Q6ZWL3 525 aaPredicted RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 ARMCX6Q7L4S7 300 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 SRLQ86TD4 932 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 ZNF354CQ86Y25 554 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 RHOT1Q8IXI2 618 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PYROXD2Q8N2H3 581 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 RYBPQ8N488 228 aaPredicted RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 SLC35G2Q8TBE7 412 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 RFFLQ8WZ73 363 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 TSC1Q92574 1164 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 SERAC1Q96JX3 654 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 ELF4Q99607 663 aaPredicted RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 FERMT1Q9BQL6 677 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 GTPBP2Q9BX10 602 aaKnown RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 MAK16Q9BXY0 300 aaKnown RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 SLC39A8Q9C0K1 460 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 KLC2Q9H0B6 622 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 NOL6Q9H6R4 1146 aaKnown RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 SP110Q9HB58 689 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PDFQ9HBH1 243 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 USP29Q9HBJ7 922 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 AASDHPPTQ9NRN7 309 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 NDFIP2Q9NV92 336 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 SARDHQ9UL12 918 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 RPL26L1Q9UNX3 145 aaKnown RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 PPIL1Q9Y3C6 166 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 PCDHGA1Q9Y5H4 931 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 FADS3Q9Y5Q0 445 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 CSNK1G3Q9Y6M4 447 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 TRPM6Q9BX84 2022 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 ADAMTS9Q9P2N4 1935 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 COL5A1P20908 1838 aaPredicted RBP6.48□□□□□ -1.37
USP54-202ENST00000413442 SDK1Q7Z5N4 2213 aa6.48□□□□□ -1.37
USP54-202ENST00000413442 FRYLO94915 3013 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 GVINP1Q7Z2Y8 2422 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 A0A1W2PQU0 124 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 DCDC2BA2VCK2 349 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 A6NNZ2 444 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 K7ERQ8 282 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 PSMD11O00231 422 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 NEMP1O14524 444 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 TPP1O14773 563 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 AREL1O15033 823 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 MATN3O15232 486 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 TNFSF14O43557 240 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 BNIP3LO60238 219 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 TM7SF2O76062 418 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 TMCC1O94876 653 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 GJB6O95452 261 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 PYGLP06737 847 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 CTSLP07711 333 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 HOXC4P09017 264 aaPredicted RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 VAV1P15498 845 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 FECHP22830 423 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 CDC25BP30305 580 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 GGCXP38435 758 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 BLKP51451 505 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 NOVA1P51513 510 aaKnown RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 ARSEP51690 589 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 ADKP55263 362 aaKnown RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 NXPH1P58417 271 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 TAS2R38P59533 333 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 COPS2P61201 443 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 HNRNPKP61978 463 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP54-202ENST00000413442 SLC25A11Q02978 314 aaKnown RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 TFDP2Q14188 446 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 KRT81Q14533 505 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 LBRQ14739 615 aaKnown RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 CYTH1Q15438 398 aa6.47□□□□□ -1.37
USP54-202ENST00000413442 TRIP6Q15654 476 aaKnown RBP6.47□□□□□ -1.37
USP54-202ENST00000413442 CCDC6Q16204 474 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms