RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 CCNCP24863 283 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 TARSP26639 723 aaKnown RBP13.18□□□□□ -0.3
LITAF-203ENST00000413364 CRABP2P29373 138 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 GPR15P49685 360 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 OLIG2Q13516 323 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 SEPT6Q14141 434 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 PLEKHG4Q58EX7 1191 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 FAM171A1Q5VUB5 890 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 EFHD2Q96C19 240 aaPredicted RBP13.18□□□□□ -0.3
LITAF-203ENST00000413364 ERP27Q96DN0 273 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 ECSITQ9BQ95 431 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.18□□□□□ -0.33e-7■■□□□ 13.1
LITAF-203ENST00000413364 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
LITAF-203ENST00000413364 NUDT5Q9UKK9 219 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 VANGL2Q9ULK5 521 aa13.18□□□□□ -0.3
LITAF-203ENST00000413364 DFFAO00273 331 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 PSMD3O43242 534 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 USP12O75317 370 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 RPL5P46777 297 aaKnown RBP13.17□□□□□ -0.3
LITAF-203ENST00000413364 RPL26P61254 145 aaKnown RBP13.17□□□□□ -0.3
LITAF-203ENST00000413364 FRG1Q14331 258 aaKnown RBP13.17□□□□□ -0.3
LITAF-203ENST00000413364 PRPSAP1Q14558 356 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 FYB2Q5VWT5 728 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 NLRP9Q7RTR0 991 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 SATL1Q86VE3 508 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 FAM126BQ8IXS8 530 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 KLHDC8BQ8IXV7 354 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 ATPAF2Q8N5M1 289 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 ANKLE1Q8NAG6 615 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 C10orf82Q8WW14 230 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 SEPT8Q92599 483 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 COX4I2Q96KJ9 171 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 NSMCE3Q96MG7 304 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 TUBB6Q9BUF5 446 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 PLGRKTQ9HBL7 147 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 IL37Q9NZH6 218 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 DMTF1Q9Y222 760 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 TLR6Q9Y2C9 796 aa13.17□□□□□ -0.3
LITAF-203ENST00000413364 CACNG3O60359 315 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 SLC2A3P11169 496 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 COL6A2P12110 1019 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 PTPN2P17706 415 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 FGFR3P22607 806 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 CRHR1P34998 444 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 NPY2RP49146 381 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 PRMT2P55345 433 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 ARHGEF6Q15052 776 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 IL23RQ5VWK5 629 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 AFMIDQ63HM1 303 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 ARHGAP36Q6ZRI8 547 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 NDUFAF2Q8N183 169 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 CNTD1Q8N815 330 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 DNAAF3Q8N9W5 541 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 ATAD1Q8NBU5 361 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 ZNF398Q8TD17 642 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 ACMSDQ8TDX5 336 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 CERS2Q96G23 380 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 SLC39A13Q96H72 371 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 FCRL3Q96P31 734 aaPredicted RBP13.16□□□□□ -0.3
LITAF-203ENST00000413364 PGLYRP2Q96PD5 576 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 GPR62Q9BZJ7 368 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 SLC13A1Q9BZW2 595 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 SAR1AQ9NR31 198 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 GMIPQ9P107 970 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 SLC17A6Q9P2U8 582 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 HS3ST4Q9Y661 456 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 PLXNA3P51805 1871 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 MYO16Q9Y6X6 1858 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 E9PAM4 449 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 KLF11O14901 512 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 VILLO15195 856 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 AP1G1O43747 822 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 FKTNO75072 461 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 MOCS2O96007 188 aaPredicted RBP13.16□□□□□ -0.3
LITAF-203ENST00000413364 GATMP50440 423 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 MLLT6P55198 1093 aaPredicted RBP13.16□□□□□ -0.3
LITAF-203ENST00000413364 EIF2B5Q13144 721 aaKnown RBP13.16□□□□□ -0.3
LITAF-203ENST00000413364 HNRNPDQ14103 355 aaKnown RBP13.16□□□□□ -0.3
LITAF-203ENST00000413364 CES3Q6UWW8 571 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 TMEM135Q86UB9 458 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 TTC9BQ8N6N2 239 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 RTL3Q8N8U3 475 aaKnown RBP13.16□□□□□ -0.3
LITAF-203ENST00000413364 DDHD1Q8NEL9 900 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 C1orf74Q96LT6 269 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 HEPHQ9BQS7 1158 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 TSSK1BQ9BXA7 367 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 SLC39A8Q9C0K1 460 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 MARCH5Q9NX47 278 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 LRFN2Q9ULH4 789 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 SATB2Q9UPW6 733 aa13.16□□□□□ -0.3
LITAF-203ENST00000413364 FAM92AA1XBS5 289 aa13.15□□□□□ -0.3
LITAF-203ENST00000413364 MAGEB16A2A368 324 aa13.15□□□□□ -0.3
LITAF-203ENST00000413364 TBKBP1A7MCY6 615 aa13.15□□□□□ -0.3
LITAF-203ENST00000413364 WASH4PA8MWX3 477 aa13.15□□□□□ -0.3
LITAF-203ENST00000413364 FAM47E-STBD1D6RA91 191 aa13.15□□□□□ -0.3
LITAF-203ENST00000413364 AP3B1O00203 1094 aa13.15□□□□□ -0.3
LITAF-203ENST00000413364 TNFRSF10AO00220 468 aa13.15□□□□□ -0.3
LITAF-203ENST00000413364 MAFKO60675 156 aa13.15□□□□□ -0.3
LITAF-203ENST00000413364 USP1O94782 785 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms