RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 KCTD15Q96SI1 283 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-201ENST00000412141 FUCA2Q9BTY2 467 aa11.77□□□□□ -0.53
LINC00963-201ENST00000412141 WRAP53Q9BUR4 548 aaKnown RBP11.77□□□□□ -0.53
LINC00963-201ENST00000412141 CATSPERBQ9H7T0 1116 aa11.77□□□□□ -0.53
LINC00963-201ENST00000412141 ERVMER34-1Q9H9K5 563 aa11.77□□□□□ -0.53
LINC00963-201ENST00000412141 DNAJC28Q9NX36 388 aa11.77□□□□□ -0.53
LINC00963-201ENST00000412141 AIPL1Q9NZN9 384 aa11.77□□□□□ -0.53
LINC00963-201ENST00000412141 IPO11Q9UI26 975 aaKnown RBP11.77□□□□□ -0.53
LINC00963-201ENST00000412141 TDRD6O60522 2096 aaKnown RBP11.77□□□□□ -0.53
LINC00963-201ENST00000412141 TP53BP1Q12888 1972 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-201ENST00000412141 TMEM191CA6NGB0 347 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 ZSCAN5CA6NGD5 496 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-201ENST00000412141 TAF4O00268 1085 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 DFFAO00273 331 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 TRIM38O00635 465 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 YKT6O15498 198 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 SIGLEC6O43699 453 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 PRPSAP2O60256 369 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 MMP20O60882 483 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 RNF8O76064 485 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 PIGNO95427 931 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 IGSF6O95976 241 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 MYF5P13349 255 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 XPAP23025 273 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-201ENST00000412141 MIPP30301 263 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 PAPOLAP51003 745 aaKnown RBP11.76□□□□□ -0.53
LINC00963-201ENST00000412141 UBASH3AP57075 661 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 YBEYP58557 167 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-201ENST00000412141 SEMG2Q02383 582 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 RAD51Q06609 339 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 OVGP1Q12889 678 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 CYTH1Q15438 398 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 NFKBIBQ15653 356 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 PARP15Q460N3 678 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 ERMARDQ5T6L9 678 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 TMPRSS7Q7RTY8 843 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 SLC25A45Q8N413 288 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 PAF1Q8N7H5 531 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 BMFQ96LC9 184 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 NCAPGQ9BPX3 1015 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
LINC00963-201ENST00000412141 TTYH3Q9C0H2 523 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 SLC39A8Q9C0K1 460 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 CCDC86Q9H6F5 360 aaKnown RBP11.76□□□□□ -0.53
LINC00963-201ENST00000412141 RETREG1Q9H6L5 497 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 KLHL11Q9NVR0 708 aa11.76□□□□□ -0.53
LINC00963-201ENST00000412141 UBA2Q9UBT2 640 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-201ENST00000412141 TRABD2BA6NFA1 517 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 A6NNZ2 444 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 GOLGA6L19H0YKK7 550 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 FGF10O15520 208 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-201ENST00000412141 SPINT1O43278 529 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 TSPAN6O43657 245 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 NEBLO76041 1014 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 PRKCGP05129 697 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 JUPP14923 745 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 TIMP2P16035 220 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 ERCC2P18074 760 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 DGKAP23743 735 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 PRKCIP41743 596 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 CYP4F3Q08477 520 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 TCEA2Q15560 299 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 SMTNL2Q2TAL5 461 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 KIAA1161Q6NSJ0 714 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 PPP1R2P3Q6NXS1 205 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 RFX8Q6ZV50 586 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 KANSL1Q7Z3B3 1105 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 PLPP6Q8IY26 295 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 SLC22A18ASQ8N1D0 253 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 UMODL1-AS1Q8N2C9 162 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 GALNT15Q8N3T1 639 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 VOPP1Q96AW1 172 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 BTBD6Q96KE9 485 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 C1QTNF2Q9BXJ5 285 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 LHX3Q9UBR4 397 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 MFHAS1Q9Y4C4 1052 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 PLXNB3Q9ULL4 1909 aa11.75□□□□□ -0.53
LINC00963-201ENST00000412141 URB1O60287 2271 aaKnown RBP11.74□□□□□ -0.53
LINC00963-201ENST00000412141 SMG1Q96Q15 3661 aaKnown RBP11.74□□□□□ -0.53
LINC00963-201ENST00000412141 ARHGAP42A6NI28 874 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 WASH4PA8MWX3 477 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 FPGTO14772 594 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 AP1G1O43747 822 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 LRCH4O75427 683 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 RFPL3O75679 317 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 DKK1O94907 266 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 GZMAP12544 262 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
LINC00963-201ENST00000412141 TCF4P15884 667 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 SSR1P43307 286 aaKnown RBP11.74□□□□□ -0.53
LINC00963-201ENST00000412141 ACADVLP49748 655 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 AIF1P55008 147 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 DAB2P98082 770 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 PDE1CQ14123 709 aaPredicted RBP11.74□□□□□ -0.53
LINC00963-201ENST00000412141 SMAD1Q15797 465 aaKnown RBP11.74□□□□□ -0.53
LINC00963-201ENST00000412141 HS1BP3Q53T59 392 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 TPRG1LQ5T0D9 272 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms