RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 GCATO75600 419 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 TNFSF15O95150 251 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 POP4O95707 220 aaKnown RBP16.97■□□□□ 0.31
MRPL55-220ENST00000411464 CD160O95971 181 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 GKP32189 559 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 ABL2P42684 1182 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 SNRPD1P62314 119 aaKnown RBP16.97■□□□□ 0.31
MRPL55-220ENST00000411464 C1orf61Q13536 156 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 C2CD6Q53TS8 623 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 FAXCQ5TGI0 409 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 TAF3Q5VWG9 929 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 RWDD4Q6NW29 188 aaKnown RBP16.97■□□□□ 0.31
MRPL55-220ENST00000411464 ESRP1Q6NXG1 681 aaKnown RBP16.97■□□□□ 0.31
MRPL55-220ENST00000411464 CCDC81Q6ZN84 652 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 TTC7BQ86TV6 843 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 PHACTR4Q8IZ21 702 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 RBFAQ8N0V3 343 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 CENPTQ96BT3 561 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.97■□□□□ 0.31
MRPL55-220ENST00000411464 C1QTNF7Q9BXJ2 289 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 OSBPL1AQ9BXW6 950 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 SEMA4CQ9C0C4 833 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.97■□□□□ 0.31
MRPL55-220ENST00000411464 KIAA1468Q9P260 1216 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 OR12D3Q9UGF7 316 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 GGT7Q9UJ14 662 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 TMEM59LQ9UK28 342 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 ITM2BQ9Y287 266 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 SSUH2Q9Y2M2 353 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 CDRT15L2A8MXV6 281 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 K7ENP7 123 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 GADD45BO75293 160 aaPredicted RBP16.96■□□□□ 0.31
MRPL55-220ENST00000411464 LSM8O95777 96 aaKnown RBP16.96■□□□□ 0.31
MRPL55-220ENST00000411464 UGT2B4P06133 528 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 MLLT3P42568 568 aaPredicted RBP16.96■□□□□ 0.31
MRPL55-220ENST00000411464 MAPKAPK2P49137 400 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 YPEL5P62699 121 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 SKOR1P84550 965 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 ATP11AP98196 1134 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 SPIDRQ14159 915 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 DRAP1Q14919 205 aaPredicted RBP16.96■□□□□ 0.31
MRPL55-220ENST00000411464 MAN2A1Q16706 1144 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 MYLK3Q32MK0 819 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 ARL13BQ3SXY8 428 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 PERM1Q5SV97 790 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 C6orf132Q5T0Z8 1188 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 INO80CQ6PI98 192 aaPredicted RBP16.96■□□□□ 0.31
MRPL55-220ENST00000411464 ARCQ7LC44 396 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 BNIPLQ7Z465 357 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 VPS36Q86VN1 386 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 SLC35F3Q8IY50 421 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 OR2AP1Q8NGE2 309 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 PRR11Q96HE9 360 aaPredicted RBP16.96■□□□□ 0.31
MRPL55-220ENST00000411464 TBATAQ96M53 351 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 KLHL32Q96NJ5 620 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 TCEAL2Q9H3H9 227 aaPredicted RBP16.96■□□□□ 0.31
MRPL55-220ENST00000411464 RETREG1Q9H6L5 497 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 SYNDIG1Q9H7V2 258 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 PADI4Q9UM07 663 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 DOLKQ9UPQ8 538 aa16.96■□□□□ 0.31
MRPL55-220ENST00000411464 CCDC187A0A096LP49 1063 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 YY2O15391 372 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 GSRP00390 522 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 ADRA1BP35368 520 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 PPARDQ03181 441 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 CAMK4Q16566 473 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 TRNP1Q6NT89 227 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 GDPD4Q6W3E5 623 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 FAM114A1Q8IWE2 563 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 MLKLQ8NB16 471 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 SCG3Q8WXD2 468 aaKnown RBP16.95■□□□□ 0.3
MRPL55-220ENST00000411464 CPA5Q8WXQ8 436 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 ARHGEF2Q92974 986 aaKnown RBP16.95■□□□□ 0.3
MRPL55-220ENST00000411464 MED8Q96G25 268 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 CCDC3Q9BQI4 270 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 MAGEH1Q9H213 219 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 NDST4Q9H3R1 872 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 WDR70Q9NW82 654 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 DNAI1Q9UI46 699 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 DOCK9Q9BZ29 2069 aa16.95■□□□□ 0.3
MRPL55-220ENST00000411464 TENM4Q6N022 2769 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 TOR1BO14657 336 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 AREL1O15033 823 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 MMP20O60882 483 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 TM7SF2O76062 418 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 ITGA2BP08514 1039 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 PRKCSHP14314 528 aaPredicted RBP16.94■□□□□ 0.3
MRPL55-220ENST00000411464 TSHRP16473 764 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 RHOQP17081 205 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 EIF4A3P38919 411 aaKnown RBP16.94■□□□□ 0.3
MRPL55-220ENST00000411464 RAD51Q06609 339 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 ZSCAN23Q3MJ62 389 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 VWA3BQ502W6 1294 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 KIAA1614Q5VZ46 1190 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 LEKR1Q6ZMV7 388 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 CLEC14AQ86T13 490 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 CXorf40AQ8TE69 158 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 LRRC61Q9BV99 259 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 NDFIP2Q9NV92 336 aa16.94■□□□□ 0.3
MRPL55-220ENST00000411464 GULP1Q9UBP9 304 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms