RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 SPATS2LQ9NUQ6 558 aaKnown RBP17.15■□□□□ 0.34
GCFC2-202ENST00000409857 SMPD4Q9NXE4 827 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 C5orf42Q9H799 3197 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 HEPACAM2A8MVW5 462 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 MSI1O43347 362 aaKnown RBP17.15■□□□□ 0.34
GCFC2-202ENST00000409857 VIPR2P41587 438 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 SLC18A2Q05940 514 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 DEUP1Q05D60 604 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 FCHO2Q0JRZ9 810 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 HADHQ16836 314 aaKnown RBP17.15■□□□□ 0.34
GCFC2-202ENST00000409857 BRMS1LQ5PSV4 323 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 SH3PXD2AQ5TCZ1 1133 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 TREML1Q86YW5 311 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 RNF217Q8TC41 542 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 BPIFB1Q8TDL5 484 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 RSPRY1Q96DX4 576 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 LSM7Q9UK45 103 aaKnown RBP17.15■□□□□ 0.34
GCFC2-202ENST00000409857 TEX264Q9Y6I9 313 aa17.15■□□□□ 0.34
GCFC2-202ENST00000409857 CXorf49A8MYA2 514 aaPredicted RBP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 GREM1O60565 184 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 SMIM24O75264 130 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 TGDSO95455 350 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 TFE3P19532 575 aaPredicted RBP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 MIPP30301 263 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 PGM1P36871 562 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 TAZQ16635 292 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 CTAGE3PQ8IX95 158 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 KBTBD2Q8IY47 623 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 PDCD7Q8N8D1 485 aaKnown RBP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 FAM172AQ8WUF8 416 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 SRPK1Q96SB4 655 aaKnown RBP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 PHACTR1Q9C0D0 580 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 PIGVQ9NUD9 493 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 CFAP97Q9P2B7 532 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 EFR3BQ9Y2G0 817 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 SH3BP1Q9Y3L3 701 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 TRIM49D1C9J1S8 452 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 H3BRJ5 948 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 MCF2LO15068 1137 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 ENO1P06733 434 aaKnown RBP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 KITP10721 976 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 CCR1P32246 355 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 HARS2P49590 506 aaKnown RBP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 C15orf59Q2T9L4 293 aaPredicted RBP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 FAXCQ5TGI0 409 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 DARS2Q6PI48 645 aaKnown RBP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 VITQ6UXI7 678 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 Q6ZNB5 142 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 PPM1NQ8N819 430 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 STMN2Q93045 179 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 CLPTM1LQ96KA5 538 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 TUBB6Q9BUF5 446 aa17.14■□□□□ 0.33
GCFC2-202ENST00000409857 MARCOQ9UEW3 520 aaPredicted RBP17.14■□□□□ 0.33
GCFC2-202ENST00000409857 KCNU1A8MYU2 1149 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 B2RBV5 119 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 APOC4-APOC2K7ER74 178 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 UGT1A9O60656 530 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 MAP3K6O95382 1288 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 APOC2P02655 101 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 PSMC3P17980 439 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 HDAC4P56524 1084 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 NME3Q13232 169 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 LBRQ14739 615 aaKnown RBP17.13■□□□□ 0.33
GCFC2-202ENST00000409857 KRT72Q14CN4 511 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 C11orf91Q3C1V1 193 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.13■□□□□ 0.33
GCFC2-202ENST00000409857 RIN3Q8TB24 985 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 TEKT4Q8WW24 435 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 LRRC3BQ96PB8 259 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 PEBP4Q96S96 227 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 TRIM56Q9BRZ2 755 aaKnown RBP17.13■□□□□ 0.33
GCFC2-202ENST00000409857 SLC13A1Q9BZW2 595 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 UGT1A7Q9HAW7 530 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 UGT1A10Q9HAW8 530 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 UGT1A8Q9HAW9 530 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 THG1LQ9NWX6 298 aaKnown RBP17.13■□□□□ 0.33
GCFC2-202ENST00000409857 ARHGEF38Q9NXL2 777 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 TBC1D14Q9P2M4 693 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 STOML2Q9UJZ1 356 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 TCF20Q9UGU0 1960 aaKnown RBP17.13■□□□□ 0.33
GCFC2-202ENST00000409857 COPEO14579 308 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 SLC9A3R1O14745 358 aaPredicted RBP17.13■□□□□ 0.33
GCFC2-202ENST00000409857 RNF8O76064 485 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 APOEP02649 317 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 BMPR2Q13873 1038 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 ACBD5Q5T8D3 534 aaPredicted RBP17.13■□□□□ 0.33
GCFC2-202ENST00000409857 IRGCQ6NXR0 463 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 OTUB2Q96DC9 234 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 TSC22D3Q99576 134 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 KCNK12Q9HB15 430 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 LIMD1Q9UGP4 676 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 LRCH1Q9Y2L9 728 aa17.13■□□□□ 0.33
GCFC2-202ENST00000409857 CORO1AP31146 461 aaKnown RBP17.12■□□□□ 0.33
GCFC2-202ENST00000409857 AIF1P55008 147 aa17.12■□□□□ 0.33
GCFC2-202ENST00000409857 OCRLQ01968 901 aa17.12■□□□□ 0.33
GCFC2-202ENST00000409857 OR52E8Q6IFG1 317 aa17.12■□□□□ 0.33
GCFC2-202ENST00000409857 C1orf228Q6PIY5 440 aa17.12■□□□□ 0.33
GCFC2-202ENST00000409857 FAF2Q96CS3 445 aa17.12■□□□□ 0.33
GCFC2-202ENST00000409857 KXD1Q9BQD3 176 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms