RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 FAM90A12PA8MX19 464 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 FAM90A23PA8MXZ1 464 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 EIF3FO00303 357 aaPredicted RBP4.31□□□□□ -1.72
PMS1-203ENST00000409593 KCNJ13O60928 360 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 ATP2C2O75185 946 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 TFPIP10646 304 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 CLCN5P51795 746 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 UBE3AQ05086 875 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 FAM27E3Q08E93 113 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 TDGQ13569 410 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 RUNX2Q13950 521 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 CTTNQ14247 550 aaKnown RBP4.31□□□□□ -1.72
PMS1-203ENST00000409593 NFATC4Q14934 902 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 IZUMO4Q1ZYL8 232 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 MAP3K21Q5TCX8 1036 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 ATG16L1Q676U5 607 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 CAPRIN2Q6IMN6 1127 aaKnown RBP4.31□□□□□ -1.72
PMS1-203ENST00000409593 CREB3L2Q70SY1 520 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 ADGRG6Q86SQ4 1221 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 DENND6AQ8IWF6 608 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 CPXM2Q8N436 756 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 RFWD2Q8NHY2 731 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 CDT1Q9H211 546 aa4.31□□□□□ -1.72
PMS1-203ENST00000409593 SPATS2LQ9NUQ6 558 aaKnown RBP4.31□□□□□ -1.72
PMS1-203ENST00000409593 SERPINI2O75830 405 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 FGF3P11487 239 aaPredicted RBP4.3□□□□□ -1.72
PMS1-203ENST00000409593 FCGR1AP12314 374 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 LIFRP42702 1097 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 PDLIM4P50479 330 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 TRAF2Q12933 501 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 KEAP1Q14145 624 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 LPIN1Q14693 890 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 CES5AQ6NT32 575 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 MOB3CQ70IA8 216 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 PRSS45Q7RTY3 260 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 MB21D2Q8IYB1 491 aaPredicted RBP4.3□□□□□ -1.72
PMS1-203ENST00000409593 MCPH1Q8NEM0 835 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 ZMIZ2Q8NF64 920 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 WASF1Q92558 559 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 GCC1Q96CN9 775 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 EYA3Q99504 573 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 CLSTN3Q9BQT9 956 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 MSTO1Q9BUK6 570 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 TAOK3Q9H2K8 898 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 C6orf106Q9H6K1 298 aaPredicted RBP4.3□□□□□ -1.72
PMS1-203ENST00000409593 CLK4Q9HAZ1 481 aaKnown RBP4.3□□□□□ -1.72
PMS1-203ENST00000409593 OCIAD1Q9NX40 245 aa4.3□□□□□ -1.72
PMS1-203ENST00000409593 C17orf113A0A1B0GUU1 675 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 ARHGAP10A1A4S6 786 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 ACOT8O14734 319 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 RPL3P39023 403 aaKnown RBP4.29□□□□□ -1.72
PMS1-203ENST00000409593 CENPAP49450 140 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 HDAC4P56524 1084 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 PLEKHO1Q53GL0 409 aaPredicted RBP4.29□□□□□ -1.72
PMS1-203ENST00000409593 CCDC105Q8IYK2 499 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 LSM14AQ8ND56 463 aaKnown RBP4.29□□□□□ -1.72
PMS1-203ENST00000409593 FAM216AQ8WUB2 273 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 RUFY2Q8WXA3 655 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 PAM16Q9Y3D7 125 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 PCDHGB5Q9Y5G0 923 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 PCDHGB1Q9Y5G3 927 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 DGKBQ9Y6T7 804 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 PABPN1LA6NDY0 278 aaKnown RBP4.29□□□□□ -1.72
PMS1-203ENST00000409593 TIMM23O14925 209 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 TTKP33981 857 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 PGM1P36871 562 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 PPM1FP49593 454 aaPredicted RBP4.29□□□□□ -1.72
PMS1-203ENST00000409593 MXI1P50539 228 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 ART1P52961 327 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 YWHAZP63104 245 aaKnown RBP4.29□□□□□ -1.72
PMS1-203ENST00000409593 CYP4A11Q02928 519 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 DCAF6Q58WW2 860 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 WDR45BQ5MNZ6 344 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 LRRTM4Q86VH4 590 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 CPOQ8IVL8 374 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 NEXN-AS1Q8NBZ9 246 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 TMEM170AQ8WVE7 144 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 TTYH1Q9H313 450 aaPredicted RBP4.29□□□□□ -1.72
PMS1-203ENST00000409593 HSF4Q9ULV5 492 aa4.29□□□□□ -1.72
PMS1-203ENST00000409593 A0A1B0GVM2 712 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.28□□□□□ -1.72
PMS1-203ENST00000409593 DYTNA2CJ06 578 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 CLEC18AA5D8T8 446 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 EBAG9O00559 213 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 SLC2A4P14672 509 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 MYF6P23409 242 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 CNTFP26441 200 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 BLKP51451 505 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 RRP1P56182 461 aaKnown RBP4.28□□□□□ -1.72
PMS1-203ENST00000409593 BIRC3Q13489 604 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 NFIL3Q16649 462 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 RETSATQ6NUM9 610 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 SLC22A25Q6T423 547 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 BBS12Q6ZW61 710 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 DCP1BQ8IZD4 617 aaKnown RBP4.28□□□□□ -1.72
PMS1-203ENST00000409593 CLEC18CQ8NCF0 446 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 HERVK_113Q902F9 699 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 ZC3HAV1LQ96H79 300 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms