RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 FBXO5Q9UKT4 447 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 CHI3L1P36222 383 aaPredicted RBP16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 GALNTL6Q49A17 601 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 ATP13A4Q4VNC1 1196 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 ARCQ7LC44 396 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 APTXQ7Z2E3 356 aaKnown RBP16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 DTNBP1Q96EV8 351 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 SNX6Q9UNH7 406 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 ERVW-1Q9UQF0 538 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 URADA6NGE7 173 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 KCNU1A8MYU2 1149 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 C1RP00736 705 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 FLT3P36888 993 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 HNRNPDQ14103 355 aaKnown RBP16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 PMF1Q6P1K2 205 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 KLHL35Q6PF15 583 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 C16orf87Q6PH81 154 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 NPNTQ6UXI9 565 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 UNC5AQ6ZN44 842 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 ZNF75CPQ92670 426 aaPredicted RBP16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 MYO19Q96H55 970 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 AHCYL2Q96HN2 611 aaKnown RBP16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 TM6SF2Q9BZW4 377 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 STYXL1Q9Y6J8 313 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 SLC38A8A6NNN8 435 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 E9PAM4 449 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 KRT20P35900 424 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 PLOD1Q02809 727 aaPredicted RBP16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 C11orf96Q7Z7L8 435 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 SAPCD2Q86UD0 394 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 DACT3Q96B18 629 aaPredicted RBP16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 PRRG3Q9BZD7 231 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 NWD2Q9ULI1 1742 aa16.94■□□□□ 0.3
PCDHA13-202ENST00000409494 PEX10O60683 326 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 SNAI1O95863 264 aaPredicted RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 C8AP07357 584 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 CDC16Q13042 620 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 CYP51A1Q16850 503 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 TRMT5Q32P41 509 aaKnown RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 RAET1GQ6H3X3 334 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 DRICH1Q6PGQ1 229 aaPredicted RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 GALNT4Q8N4A0 578 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 GRIN3AQ8TCU5 1115 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 ELMO1Q92556 727 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 MYLK2Q9H1R3 596 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 PHPT1Q9NRX4 125 aaPredicted RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 NOCTQ9UK39 431 aaKnown RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 TMCC3Q9ULS5 477 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 RBM47A0AV96 593 aaKnown RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 C2CD4BA6NLJ0 364 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 AOC2O75106 756 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 DGKIO75912 1065 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 COL6A2P12110 1019 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 RGL4Q8IZJ4 473 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 SLC22A17Q8WUG5 538 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 TCF25Q9BQ70 676 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 MRPL57Q9BQC6 102 aaKnown RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 TRMOQ9BU70 441 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 SLC25A51Q9H1U9 297 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 SLC27A6Q9Y2P4 619 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 USP12O75317 370 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 GCATO75600 419 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 SLC2A4P14672 509 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 TCN1P20061 433 aaPredicted RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 IL10RBQ08334 325 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 TCEA2Q15560 299 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 GDF6Q6KF10 455 aaPredicted RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 ZCCHC8Q6NZY4 707 aaKnown RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 ALG3Q92685 438 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 GFM2Q969S9 779 aaKnown RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 LENG1Q96BZ8 264 aaPredicted RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 QKIQ96PU8 341 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 PNPLA8Q9NP80 782 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 MID1IP1Q9NPA3 183 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 CLIC5Q9NZA1 410 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 CDV3Q9UKY7 258 aaKnown RBP16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 GNA12Q03113 381 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 ACSM2AQ08AH3 577 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 MMRN1Q13201 1228 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 ATAD3BQ5T9A4 648 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 ACSM2BQ68CK6 577 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 KIAA0408Q6ZU52 694 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 MCRS1Q96EZ8 462 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 SPATA17Q96L03 361 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 BTBD10Q9BSF8 475 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 CCDC90BQ9GZT6 254 aa16.93■□□□□ 0.3
PCDHA13-202ENST00000409494 SP2Q02086 613 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 IRF8Q02556 426 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 CSTF3Q12996 717 aaKnown RBP16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 TMPRSS6Q8IU80 811 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 NIPA2Q8N8Q9 360 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 OR4L1Q8NH43 312 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 SAR1AQ9NR31 198 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 SCN3BQ9NY72 215 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 NRP1O14786 923 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 FKBP6O75344 327 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 POP4O95707 220 aaKnown RBP16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 RD3Q7Z3Z2 195 aa16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 RTL3Q8N8U3 475 aaKnown RBP16.92■□□□□ 0.3
PCDHA13-202ENST00000409494 CXorf40BQ96DE9 158 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms