RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 RARAP10276 462 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 IL4RP24394 825 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 MAN1A1P33908 653 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 RXRGP48443 463 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 ARSEP51690 589 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 NSUN2Q08J23 767 aaKnown RBP eCLIP13.12□□□□□ -0.31
SUMO1-206ENST00000409368 GRM3Q14832 879 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 SLC45A4Q5BKX6 768 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 KIAA1161Q6NSJ0 714 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 H2AFVQ71UI9 128 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 PARS2Q7L3T8 475 aaKnown RBP13.12□□□□□ -0.31
SUMO1-206ENST00000409368 ABI3BPQ7Z7G0 1075 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 CNGA4Q8IV77 575 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 NAXDQ8IW45 347 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 ZNF564Q8TBZ8 553 aaPredicted RBP13.12□□□□□ -0.31
SUMO1-206ENST00000409368 SERAC1Q96JX3 654 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 ZNF599Q96NL3 588 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 CSPG4P5Q96PW8 444 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 ELF4Q99607 663 aaPredicted RBP13.12□□□□□ -0.31
SUMO1-206ENST00000409368 PCDH18Q9HCL0 1135 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 UBA2Q9UBT2 640 aaPredicted RBP13.12□□□□□ -0.31
SUMO1-206ENST00000409368 PCOLCE2Q9UKZ9 415 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 ZFR2Q9UPR6 939 aaKnown RBP13.12□□□□□ -0.31
SUMO1-206ENST00000409368 KMT2BQ9UMN6 2715 aaPredicted RBP13.12□□□□□ -0.31
SUMO1-206ENST00000409368 USP24Q9UPU5 2620 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 LRRK1Q38SD2 2015 aa13.12□□□□□ -0.31
SUMO1-206ENST00000409368 A0A1W2PQU0 124 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 FAM221BA6H8Z2 402 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 H0Y8X5 98 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 H3BRJ5 948 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 J3KR12 359 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 SH3BP5O60239 455 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 PROSCO94903 275 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 IGSF6O95976 241 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 CCT8P50990 548 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
SUMO1-206ENST00000409368 DNA2P51530 1060 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 RHOAP61586 193 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 RPS21P63220 83 aaKnown RBP13.11□□□□□ -0.31
SUMO1-206ENST00000409368 IL10RBQ08334 325 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
SUMO1-206ENST00000409368 SHBQ15464 509 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 POM121L1PQ3SYA9 428 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 PPP6R3Q5H9R7 873 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-206ENST00000409368 TMCO4Q5TGY1 634 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 TXNRD3NBQ6F5E7 133 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 GDPD4Q6W3E5 623 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 LRRC49Q8IUZ0 686 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 OXR1Q8N573 874 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 RNF214Q8ND24 703 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 LENG8Q96PV6 779 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-206ENST00000409368 PSKH2Q96QS6 385 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 TUBGCP5Q96RT8 1024 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 C1QTNF2Q9BXJ5 285 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 ZDHHC6Q9H6R6 413 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 ZNHIT6Q9NWK9 470 aaKnown RBP13.11□□□□□ -0.31
SUMO1-206ENST00000409368 INTUQ9ULD6 942 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 HS3ST3A1Q9Y663 406 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 ASPMQ8IZT6 3477 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 IGF2RP11717 2491 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 KNTC1P50748 2209 aa13.11□□□□□ -0.31
SUMO1-206ENST00000409368 ZNF487B1APH4 448 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 KRIT1O00522 736 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 DAPK3O43293 454 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 TRIM16O95361 564 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 PEX11BO96011 259 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 TPM1P09493 284 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 HNRNPA2B1P22626 353 aaKnown RBP13.1□□□□□ -0.31
SUMO1-206ENST00000409368 ARL4AP40617 200 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 ABL2P42684 1182 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 C21orf59P57076 290 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 FAM193AP78312 1265 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 RAD51Q06609 339 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 ATXN7L2Q5T6C5 722 aaPredicted RBP13.1□□□□□ -0.31
SUMO1-206ENST00000409368 FBXL19Q6PCT2 694 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 LAYNQ6UX15 382 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 LEKR1Q6ZMV7 388 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 KANSL1Q7Z3B3 1105 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 ADAT2Q7Z6V5 191 aaKnown RBP13.1□□□□□ -0.31
SUMO1-206ENST00000409368 VSIG1Q86XK7 387 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 SPATS2Q86XZ4 545 aaKnown RBP13.1□□□□□ -0.31
SUMO1-206ENST00000409368 DENND6BQ8NEG7 585 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 CTNNBL1Q8WYA6 563 aaPredicted RBP13.1□□□□□ -0.31
SUMO1-206ENST00000409368 FATE1Q969F0 183 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 FAF2Q96CS3 445 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 IFT43Q96FT9 208 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 CELF6Q96J87 481 aaKnown RBP13.1□□□□□ -0.31
SUMO1-206ENST00000409368 FEM1CQ96JP0 617 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 BTBD6Q96KE9 485 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 ZNF641Q96N77 438 aaPredicted RBP13.1□□□□□ -0.31
SUMO1-206ENST00000409368 KLF6Q99612 283 aaPredicted RBP13.1□□□□□ -0.31
SUMO1-206ENST00000409368 CHP1Q99653 195 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 CDC6Q99741 560 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 PACSIN1Q9BY11 444 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 GDF3Q9NR23 364 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 AASDHPPTQ9NRN7 309 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.1□□□□□ -0.31
SUMO1-206ENST00000409368 ETNK2Q9NVF9 386 aa13.1□□□□□ -0.31
SUMO1-206ENST00000409368 ANGPTL2Q9UKU9 493 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms