RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 ADPRHP54922 357 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 CCDC15Q0P6D6 951 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 ZNF211Q13398 564 aaPredicted RBP20.56■□□□□ 0.88
PTCD3-202ENST00000409326 ZNF805Q5CZA5 627 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 PIP5KL1Q5T9C9 394 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 GDPD4Q6W3E5 623 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.56■□□□□ 0.88
PTCD3-202ENST00000409326 ERN2Q76MJ5 926 aaKnown RBP20.56■□□□□ 0.88
PTCD3-202ENST00000409326 ASCL5Q7RTU5 278 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 SRLQ86TD4 932 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 FAM122AQ96E09 287 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 TUBGCP5Q96RT8 1024 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 AMACRQ9UHK6 382 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 GMEB2Q9UKD1 530 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 DOCK9Q9BZ29 2069 aa20.56■□□□□ 0.88
PTCD3-202ENST00000409326 PLRG1O43660 514 aaKnown RBP20.55■□□□□ 0.88
PTCD3-202ENST00000409326 TJP3O95049 919 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 RETP07949 1114 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 CCNB1P14635 433 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 PTGER3P43115 390 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 DHPSP49366 369 aaPredicted RBP20.55■□□□□ 0.88
PTCD3-202ENST00000409326 NEK3P51956 506 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 AP1S1P61966 158 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 AP1B1Q10567 949 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 RPS6KA1Q15418 735 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 SLC41A1Q8IVJ1 513 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 DEFB119Q8N690 84 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 OR14C36Q8NHC7 312 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 FOXJ1Q92949 421 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 HAUS1Q96CS2 278 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 KLHL32Q96NJ5 620 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 NUDCD1Q96RS6 583 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 KDM4CQ9H3R0 1056 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 HAUS2Q9NVX0 235 aa20.55■□□□□ 0.88
PTCD3-202ENST00000409326 RBM22Q9NW64 420 aaKnown RBP eCLIP20.55■□□□□ 0.88
PTCD3-202ENST00000409326 ZFHX2Q9C0A1 2572 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 LRRC72A6NJI9 287 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 PIGNO95427 931 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 SCNN1BP51168 640 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 MAXP61244 160 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 IFI35P80217 286 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 PRKD1Q15139 912 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 RALGPS1Q5JS13 557 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 CCDC181Q5TID7 509 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 LYSMD4Q5XG99 296 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 ALG1LQ6GMV1 187 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 PARS2Q7L3T8 475 aaKnown RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 ARMCX6Q7L4S7 300 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 OR2T34Q8NGX1 318 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 TFB1MQ8WVM0 346 aaKnown RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 HSPA12BQ96MM6 686 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 ZNF641Q96N77 438 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 POLR1EQ9GZS1 481 aaKnown RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 C6orf106Q9H6K1 298 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 ATP13A3Q9H7F0 1226 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 NT5MQ9NPB1 228 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 TRMT1Q9NXH9 659 aaKnown RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 NCDNQ9UBB6 729 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 DKK3Q9UBP4 350 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 PYCARDQ9ULZ3 195 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 PCDHGA5Q9Y5G8 931 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 FAM186AA6NE01 2351 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 RIF1Q5UIP0 2472 aaKnown RBP20.54■□□□□ 0.88
PTCD3-202ENST00000409326 TRPM6Q9BX84 2022 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 PLXNA2O75051 1894 aa20.54■□□□□ 0.88
PTCD3-202ENST00000409326 C16orf96A6NNT2 1141 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 METTL12A8MUP2 240 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 C10orf142B7Z368 130 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 KCNK1O00180 336 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 GJB3O75712 270 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 ADRB3P13945 408 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 SERPINA4P29622 427 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 TAS2R38P59533 333 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 NOMO1Q15155 1222 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 SEL1L2Q5TEA6 688 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 FBXL19Q6PCT2 694 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 NCEH1Q6PIU2 408 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 HCAR2Q8TDS4 363 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 IL12RB2Q99665 862 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 CARD9Q9H257 536 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 SUV39H2Q9H5I1 410 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 SCUBE2Q9NQ36 999 aa20.53■□□□□ 0.88
PTCD3-202ENST00000409326 EP300Q09472 2414 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-202ENST00000409326 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-202ENST00000409326 TSPAN11A1L157 253 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 BCLAF3A2AJT9 711 aaKnown RBP20.52■□□□□ 0.88
PTCD3-202ENST00000409326 FAM47DPA6NHR8 397 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 MEI4A8MW99 385 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 HACD1B0YJ81 288 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 GFRA3O60609 400 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 NEBLO76041 1014 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 HLA-DQB2P05538 268 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 OTUD4Q01804 1114 aaKnown RBP20.52■□□□□ 0.88
PTCD3-202ENST00000409326 CREB5Q02930 508 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 BCL2L1Q07817 233 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 ZBTB17Q13105 803 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 KLF1Q13351 362 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-202ENST00000409326 XRCC4Q13426 336 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 KIAA0895LQ68EN5 471 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 CYP2U1Q7Z449 544 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms