RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 SNRPAP09012 282 aaKnown RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 NDST1P52848 882 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 CCL23P55773 120 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 IRX1P78414 480 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 ILF3Q12906 894 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEB-204ENST00000409198 SEMA3AQ14563 771 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 CARD16Q5EG05 197 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 TTC33Q6PID6 262 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 LPCAT2Q7L5N7 544 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 HERVK_113Q902F9 699 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 LENG9Q96B70 501 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 CASD1Q96PB1 797 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 RANBP17Q9H2T7 1088 aaKnown RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 PADI2Q9Y2J8 665 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 TSC22D4Q9Y3Q8 395 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 FAM25EA8MYX2 175 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ZNF862O60290 1169 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 MARC1Q5VT66 337 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 PTERQ96BW5 349 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEB-204ENST00000409198 GRIP1Q9Y3R0 1128 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 SPIN1Q9Y657 262 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 CIB4A0PJX0 185 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 METTL21EPA6NDL7 271 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 BHMG1C9JSJ3 638 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 ZNF200P98182 395 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 CSHL1Q14406 222 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ZNF677Q86XU0 584 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 AADATQ8N5Z0 425 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 MYLPFQ96A32 169 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 CRAMP1Q96RY5 1269 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ILKAPQ9H0C8 392 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 PRMT8Q9NR22 394 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 TMEM216Q9P0N5 145 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 TAF6LQ9Y6J9 622 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 PPRC1Q5VV67 1664 aaKnown RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 RAMP2O60895 175 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 GLRA3O75311 464 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 FSBPO95073 299 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 NDUFA10O95299 355 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 EBNA1BP2Q99848 306 aaKnown RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 SLC29A3Q9BZD2 475 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 DPEP2Q9H4A9 486 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 HHATLQ9HCP6 504 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 HEY2Q9UBP5 337 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ZNF70Q9UC06 446 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 CACNA1FO60840 1977 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 COL17A1Q9UMD9 1497 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 CASTOR2A6NHX0 329 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 DNALI1O14645 258 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 ARPC2O15144 300 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 S100A6P06703 90 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 NT5EP21589 574 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 HNF1BP35680 557 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 CRHR2Q13324 411 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 SF1Q15637 639 aaKnown RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 PLPP4Q5VZY2 271 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 CHSY3Q70JA7 882 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 RAD54LQ92698 747 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 NPAS2Q99743 824 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 OPTCQ9UBM4 332 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 RGS17Q9UGC6 210 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 SNCAIPQ9Y6H5 919 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 RLN2P04090 185 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ASLP04424 464 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ZNF23P17027 643 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 UGT2B15P54855 530 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 RPS6P62753 249 aaKnown RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 KCNT1Q5JUK3 1230 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ANXA8L1Q5VT79 327 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 SLC35F6Q8N357 371 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 HDAC2Q92769 488 aaKnown RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 MIEF2Q96C03 454 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 C2orf49Q9BVC5 232 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 NELFAQ9H3P2 528 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 L1RE1Q9UN81 338 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 SMG5Q9UPR3 1016 aaKnown RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 PLXNC1O60486 1568 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 BTBD17A6NE02 478 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 FCGR1AP12314 374 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 PPP3R1P63098 170 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 CDK10Q15131 360 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 TMC5Q6UXY8 1006 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ANKMY2Q8IV38 441 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 GCDHQ92947 438 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 ERLEC1Q96DZ1 483 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ANKRD27Q96NW4 1050 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 IFT46Q9NQC8 304 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ANKEF1Q9NU02 776 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 SPATA6Q9NWH7 488 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 CLN6Q9NWW5 311 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 KIAA1522Q9P206 1035 aaPredicted RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 CDH9Q9ULB4 789 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 ATP6V1G1O75348 118 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 GABBR2O75899 941 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 CYP2F1P24903 491 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 RPS3AP61247 264 aaKnown RBP3.42□□□□□ -1.86
NEB-204ENST00000409198 SLC34A1Q06495 639 aa3.42□□□□□ -1.86
NEB-204ENST00000409198 FAM153CQ494X1 144 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms