RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SH3D19Q5HYK7 790 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 MON1BQ7L1V2 547 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 LZTR1Q8N653 840 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 PACRGLQ8N7B6 248 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 STAG3L4Q8TBR4 150 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 FAM45AQ8TCE6 357 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 RHOJQ9H4E5 214 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 TRAF6Q9Y4K3 522 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 HAT1O14929 419 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 ZNF37AP17032 561 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-202ENST00000409031 CCR1P32246 355 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 PEX6Q13608 980 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 LSM12Q3MHD2 195 aaKnown RBP17.82■□□□□ 0.44
SMPD4-202ENST00000409031 C6orf183Q5T699 404 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 TMEM126BQ8IUX1 230 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 HELQQ8TDG4 1101 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 NFAT5O94916 1531 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 CNTNAP2Q9UHC6 1331 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 A0A0J9YYE9 177 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 TSPAN19P0C672 248 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 MAGP20916 626 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 ARL13AQ5H913 290 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-202ENST00000409031 INTS11Q5TA45 600 aaKnown RBP17.82■□□□□ 0.44
SMPD4-202ENST00000409031 LLGL2Q6P1M3 1020 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 PTGR2Q8N8N7 351 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-202ENST00000409031 SH3KBP1Q96B97 665 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 TMEM216Q9P0N5 145 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 TFECO14948 347 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-202ENST00000409031 FSTL1Q12841 308 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 BNIP3Q12983 259 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 MOGSQ13724 837 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 PFKFB4Q16877 469 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 SLC7A6OSQ96CW6 309 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-202ENST00000409031 ZBTB45Q96K62 511 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-202ENST00000409031 RPS6KA6Q9UK32 745 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 TMEM150BA6NC51 233 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 RGS14O43566 566 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 ITM2AO43736 263 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 SEC22BO75396 215 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 SERPINA1P01009 418 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 S100A9P06702 114 aaKnown RBP17.82■□□□□ 0.44
SMPD4-202ENST00000409031 MAPKAPK3Q16644 382 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 AMHR2Q16671 573 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 PHKG1Q16816 387 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 PLEKHO2Q8TD55 490 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 CRLS1Q9UJA2 301 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 IKZF3Q9UKT9 509 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 PHF24Q9UPV7 400 aa17.82■□□□□ 0.44
SMPD4-202ENST00000409031 C19orf81C9J6K1 198 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 RENBPP51606 427 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 CDC42P60953 191 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 DDX39BQ13838 428 aaKnown RBP17.81■□□□□ 0.44
SMPD4-202ENST00000409031 ELMSAN1Q6PJG2 1045 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 AZIN1O14977 448 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 TADA2AO75478 443 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 NPR3P17342 541 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 ENTPD1P49961 510 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 MERTKQ12866 999 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 KRT33BQ14525 404 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 NOTUMQ6P988 496 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 TPD52L3Q96J77 140 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 TRIM8Q9BZR9 551 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 CLPBQ9H078 707 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 KLHL31Q9H511 634 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 PDE10AQ9Y233 779 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 UGT2B11O75310 529 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 CNTN1Q12860 1018 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 MILR1Q7Z6M3 343 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 DEFB106AQ8N104 65 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 CELF6Q96J87 481 aaKnown RBP17.81■□□□□ 0.44
SMPD4-202ENST00000409031 NT5MQ9NPB1 228 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 ZNF624Q9P2J8 865 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-202ENST00000409031 VAV3Q9UKW4 847 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 SYNPO2Q9UMS6 1093 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 DISP2A7MBM2 1401 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 IST1P53990 364 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 ITPK1Q13572 414 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 MARC1Q5VT66 337 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 RNF219Q5W0B1 726 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-202ENST00000409031 INTS5Q6P9B9 1019 aaKnown RBP17.81■□□□□ 0.44
SMPD4-202ENST00000409031 OFCC1Q8IZS5 231 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 ZNF781Q8N8C0 355 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 ZDHHC15Q96MV8 337 aa17.81■□□□□ 0.44
SMPD4-202ENST00000409031 ZC3H4Q9UPT8 1303 aaKnown RBP17.8■□□□□ 0.44
SMPD4-202ENST00000409031 SH3PXD2BA1X283 911 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 FAM149AA5PLN7 773 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 MGAT4DA6NG13 374 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 RGS10O43665 173 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 CPB1P15086 417 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 ITGAXP20702 1163 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 ABL2P42684 1182 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 MZT2AQ6P582 158 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 CUZD1Q86UP6 607 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 MYLPFQ96A32 169 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 ATG4CQ96DT6 458 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 MMP19Q99542 508 aa17.8■□□□□ 0.44
SMPD4-202ENST00000409031 RBM4BQ9BQ04 359 aaKnown RBP17.8■□□□□ 0.44
SMPD4-202ENST00000409031 RBM4Q9BWF3 364 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms