RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ZMPSTE24O75844 475 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 NDST2P52849 883 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 SLC12A2P55011 1212 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 TBX4P57082 545 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 SREBF2Q12772 1141 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 TBL3Q12788 808 aaKnown RBP17.02■□□□□ 0.32
NUP50-203ENST00000407019 DLG1Q12959 904 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 SDHAF4Q5VUM1 108 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 CCSAPQ6IQ19 270 aaPredicted RBP17.02■□□□□ 0.32
NUP50-203ENST00000407019 NEPROQ6NW34 567 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 ZNF280BQ86YH2 543 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 KBTBD2Q8IY47 623 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 UMODL1-AS1Q8N2C9 162 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 ARHGAP18Q8N392 663 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 FUBP3Q96I24 572 aaKnown RBP eCLIP17.02■□□□□ 0.32
NUP50-203ENST00000407019 MRPL46Q9H2W6 279 aaKnown RBP17.02■□□□□ 0.32
NUP50-203ENST00000407019 FBXO44Q9H4M3 255 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 SSX2IPQ9Y2D8 614 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 SQORQ9Y6N5 450 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 MYLKQ15746 1914 aa17.02■□□□□ 0.32
NUP50-203ENST00000407019 HEATR9A2RTY3 570 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 A6NHS1 94 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 GRID2O43424 1007 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 OAZ2O95190 189 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 PEX11BO96011 259 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 RHOQP17081 205 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 PIK3R1P27986 724 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 GPR15P49685 360 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 RENBPP51606 427 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 TAS2R39P59534 338 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 POU4F1Q01851 419 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 HNRNPDQ14103 355 aaKnown RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 NFE2Q16621 373 aaPredicted RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 LSM12Q3MHD2 195 aaKnown RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 KIAA0408Q6ZU52 694 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 TFAP2DQ7Z6R9 452 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 ADGRG6Q86SQ4 1221 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 PDCD6IPQ8WUM4 868 aaKnown RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 CNDP1Q96KN2 507 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 C8orf48Q96LL4 319 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 RGS18Q9NS28 235 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 ZDHHC2Q9UIJ5 367 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 THRAP10827 490 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 CPB1P15086 417 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 TFEBP19484 476 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 CST5P28325 142 aaPredicted RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 CCND3P30281 292 aaPredicted RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 SERPINB5P36952 375 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 DSC1Q08554 894 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 DDR2Q16832 855 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 NOMO2Q5JPE7 1267 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 CAPRIN2Q6IMN6 1127 aaKnown RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 ZNF683Q8IZ20 524 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 LSMEM2Q8N112 164 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 FBXW8Q8N3Y1 598 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 GABPB2Q8TAK5 448 aaPredicted RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 CALML6Q8TD86 181 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 FATE1Q969F0 183 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 CCDC124Q96CT7 223 aaKnown RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 HMCESQ96FZ2 354 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 IMP4Q96G21 291 aaKnown RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 PPP1R36Q96LQ0 422 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 LENG8Q96PV6 779 aaPredicted RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 RANBP9Q96S59 729 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 MRPL57Q9BQC6 102 aaKnown RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 CCDC28BQ9BUN5 200 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 NUF2Q9BZD4 464 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 ZYG11BQ9C0D3 744 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 ARNT2Q9HBZ2 717 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 NT5MQ9NPB1 228 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 PRDM5Q9NQX1 630 aaPredicted RBP17.01■□□□□ 0.31
NUP50-203ENST00000407019 CDYLQ9Y232 598 aa17.01■□□□□ 0.31
NUP50-203ENST00000407019 TMEM189-UBE2V1I3L0A0 370 aa17■□□□□ 0.31
NUP50-203ENST00000407019 SLC22A2O15244 555 aa17■□□□□ 0.31
NUP50-203ENST00000407019 NPHS1O60500 1241 aa17■□□□□ 0.31
NUP50-203ENST00000407019 EOMESO95936 686 aa17■□□□□ 0.31
NUP50-203ENST00000407019 EPHA3P29320 983 aa17■□□□□ 0.31
NUP50-203ENST00000407019 SERPINH1P50454 418 aaKnown RBP17■□□□□ 0.31
NUP50-203ENST00000407019 PRKCZQ05513 592 aa17■□□□□ 0.31
NUP50-203ENST00000407019 CCNIQ14094 377 aa17■□□□□ 0.31
NUP50-203ENST00000407019 MS4A13Q5J8X5 152 aa17■□□□□ 0.31
NUP50-203ENST00000407019 TSTD2Q5T7W7 516 aa17■□□□□ 0.31
NUP50-203ENST00000407019 SPATA6LQ8N4H0 392 aa17■□□□□ 0.31
NUP50-203ENST00000407019 CCNYL1Q8N7R7 359 aa17■□□□□ 0.31
NUP50-203ENST00000407019 PCSK9Q8NBP7 692 aaKnown RBP17■□□□□ 0.31
NUP50-203ENST00000407019 ATP13A1Q9HD20 1204 aa17■□□□□ 0.31
NUP50-203ENST00000407019 TMEM248Q9NWD8 314 aa17■□□□□ 0.31
NUP50-203ENST00000407019 DONSONQ9NYP3 566 aa17■□□□□ 0.31
NUP50-203ENST00000407019 GMIPQ9P107 970 aa17■□□□□ 0.31
NUP50-203ENST00000407019 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17■□□□□ 0.31
NUP50-203ENST00000407019 POMPQ9Y244 141 aa17■□□□□ 0.31
NUP50-203ENST00000407019 CA12O43570 354 aa17■□□□□ 0.31
NUP50-203ENST00000407019 SORBS2O94875 1100 aaKnown RBP17■□□□□ 0.31
NUP50-203ENST00000407019 OR1G1P47890 313 aa17■□□□□ 0.31
NUP50-203ENST00000407019 DSG1Q02413 1049 aa17■□□□□ 0.31
NUP50-203ENST00000407019 ITKQ08881 620 aa17■□□□□ 0.31
NUP50-203ENST00000407019 NSUN2Q08J23 767 aaKnown RBP eCLIP17■□□□□ 0.31
NUP50-203ENST00000407019 CLLU1OSQ5K130 101 aa17■□□□□ 0.31
NUP50-203ENST00000407019 MARC1Q5VT66 337 aa17■□□□□ 0.31
NUP50-203ENST00000407019 CNSTQ6PJW8 725 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms