RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 MAGEA13PA6NCF6 341 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 OR51F1A6NGY5 319 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 ZBTB14O43829 449 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 H2AFYO75367 372 aaKnown RBP12.03□□□□□ -0.48
PCNX4-204ENST00000406949 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
PCNX4-204ENST00000406949 AGKQ53H12 422 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 FAM171A1Q5VUB5 890 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 EFHBQ8N7U6 833 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 FAM156AQ8NDB6 213 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 NPAS2Q99743 824 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 ECSITQ9BQ95 431 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 MRPL1Q9BYD6 325 aaKnown RBP12.03□□□□□ -0.48
PCNX4-204ENST00000406949 STN1Q9H668 368 aaKnown RBP12.03□□□□□ -0.48
PCNX4-204ENST00000406949 RAD54BQ9Y620 910 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 SHROOM3Q8TF72 1996 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 PTPRFP10586 1907 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 MANSC4A6NHS7 340 aaPredicted RBP12.02□□□□□ -0.48
PCNX4-204ENST00000406949 SMNDC1O75940 238 aaKnown RBP eCLIP12.02□□□□□ -0.48
PCNX4-204ENST00000406949 CABYRO75952 493 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 MYL4P12829 197 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 OR1E1P30953 314 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 SERPINH1P50454 418 aaKnown RBP12.02□□□□□ -0.48
PCNX4-204ENST00000406949 RENBPP51606 427 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 RAP1GDS1P52306 607 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 ST13P4Q8IZP2 240 aaPredicted RBP12.02□□□□□ -0.48
PCNX4-204ENST00000406949 LZTR1Q8N653 840 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 OR52K2Q8NGK3 314 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 GIPC2Q8TF65 315 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 HDAC10Q969S8 669 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 EXOC2Q96KP1 924 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 TSPAN18Q96SJ8 248 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 S100A14Q9HCY8 104 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 GMIPQ9P107 970 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 UXTQ9UBK9 157 aaPredicted RBP12.02□□□□□ -0.48
PCNX4-204ENST00000406949 ZDHHC2Q9UIJ5 367 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 LRFN2Q9ULH4 789 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 POMPQ9Y244 141 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 ANKRD6Q9Y2G4 727 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 DTNAQ9Y4J8 743 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 MGAMO43451 1857 aa12.02□□□□□ -0.48
PCNX4-204ENST00000406949 NCF1BA6NI72 391 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 NCF1CA8MVU1 366 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 F8W8V4 182 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 FGF10O15520 208 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 ATP5BP06576 529 aaKnown RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 HOXD8P13378 290 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 NCF1P14598 390 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 ITGAXP20702 1163 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 CCNCP24863 283 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 PEX2P28328 305 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 FKBP1BP68106 108 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 KCNA10Q16322 511 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 FBXO48Q5FWF7 155 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 RBM20Q5T481 1227 aaKnown RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 CYS1Q717R9 158 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 RAB44Q7Z6P3 723 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 CALML6Q8TD86 181 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 HEXDCQ8WVB3 486 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 NT5C3BQ969T7 300 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 TRIM4Q9C037 500 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 TRPC7Q9HCX4 862 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 TBC1D13Q9NVG8 400 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 OXSMQ9NWU1 459 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 CORO1CQ9ULV4 474 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 TCAF1Q9Y4C2 921 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 AK5Q9Y6K8 562 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 SF3B1O75533 1304 aaKnown RBP eCLIP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 A0A088AWK7 358 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 GOLGA8CPA6NN73 597 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 TMEM114B3SHH9 223 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 NT5C1B-RDH14C9J2C7 533 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 MATN3O15232 486 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 RAMP2O60895 175 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 IL1BP01584 269 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 PRKCGP05129 697 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 ARRB2P32121 409 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 HADHAP40939 763 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 RAB27AP51159 221 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 CDH13P55290 713 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 GRIK3Q13003 919 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 TRIM32Q13049 653 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 DBN1Q16643 649 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 MORN1Q5T089 497 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 ZYG11AQ6WRX3 759 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 MAVSQ7Z434 540 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 CFAP52Q8N1V2 620 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 COPS7BQ9H9Q2 264 aaPredicted RBP12.02□□□□□ -0.49
PCNX4-204ENST00000406949 EFCAB1Q9HAE3 211 aa12.02□□□□□ -0.49
PCNX4-204ENST00000406949 HEATR9A2RTY3 570 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 STX16-NPEPL1H3BU86 382 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 J3KR12 359 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 AURKAO14965 403 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 DLX3O60479 287 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 MGEA5O60502 916 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 IRF1P10914 325 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 CRABP2P29373 138 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 HCAR3P49019 387 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 PTK2BQ14289 1009 aa12.01□□□□□ -0.49
PCNX4-204ENST00000406949 RARS2Q5T160 578 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms