RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 HOXD9P28356 352 aaPredicted RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 PPM1AP35813 382 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 SKIV2L2P42285 1042 aaKnown RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 POLD2P49005 469 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 OXCT1P55809 520 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 PCLAFQ15004 111 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 NEPROQ6NW34 567 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 CHST9Q7L1S5 443 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 MTDHQ86UE4 582 aaKnown RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 PLD6Q8N2A8 252 aaKnown RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 ACVR1CQ8NER5 493 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 GABPB2Q8TAK5 448 aaPredicted RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 ZFP69BQ9UJL9 534 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 MAFFQ9ULX9 164 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 LOC285095A0A1B0GVY8 99 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 MBL2P11226 248 aaPredicted RBP24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 CPA3P15088 417 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 SAT1P21673 171 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 GABRB3P28472 473 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 MPP1Q00013 466 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 CLEC14AQ86T13 490 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 HERC6Q8IVU3 1022 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 C10orf107Q8IVU9 208 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 TSNARE1Q96NA8 513 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 ZNF395Q9H8N7 513 aaPredicted RBP24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 COPG2Q9UBF2 871 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 HEY2Q9UBP5 337 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 UBA2Q9UBT2 640 aaPredicted RBP24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 SEPT3Q9UH03 358 aa24.92■■□□□ 1.58
DNMT3A-206ENST00000406659 ILVBLA1L0T0 632 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 KIAA0355O15063 1070 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 MUSKO15146 869 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 KDELR3O43731 214 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 PAPSS2O95340 614 aaPredicted RBP24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 MYL2P10916 166 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 FGF3P11487 239 aaPredicted RBP24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 IRF9Q00978 393 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 ZBTB16Q05516 673 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 TAF1BQ53T94 588 aaPredicted RBP24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 ZNF470Q6ECI4 717 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 FBXO46Q6PJ61 603 aaPredicted RBP24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 ITIH5Q86UX2 942 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 C2CD4AQ8NCU7 369 aaPredicted RBP24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 OR52K2Q8NGK3 314 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 CALML6Q8TD86 181 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 KLHL29Q96CT2 875 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 FEM1CQ96JP0 617 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 TRPC7Q9HCX4 862 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 SMPD4Q9NXE4 827 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 PCDHB12Q9Y5F1 795 aa24.91■■□□□ 1.58
DNMT3A-206ENST00000406659 A0A1B0GVM2 712 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 TCAF2A6NFQ2 919 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 SERPINE1P05121 402 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 CA8P35219 290 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 SLC1A2P43004 574 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 SGSHP51688 502 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 CDK18Q07002 472 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 SETD3Q86TU7 594 aaPredicted RBP24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 SLC41A1Q8IVJ1 513 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 ARID3BQ8IVW6 561 aaPredicted RBP24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 WBP2Q969T9 261 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 KCNK4Q9NYG8 393 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 FBXO5Q9UKT4 447 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 TEX28O15482 410 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 UNC5CO95185 931 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 SERPINF2P08697 491 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 ATXN1LP0C7T5 689 aaKnown RBP24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 GRK2P25098 689 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 CD151P48509 253 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 SLC1A6P48664 564 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 CREMQ03060 361 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 MSLNQ13421 630 aaPredicted RBP24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 SPDYAQ5MJ70 313 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 C16orf59Q7L2K0 433 aa24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 TBC1D1Q86TI0 1168 aaPredicted RBP24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 CINPQ9BW66 212 aaPredicted RBP24.9■■□□□ 1.58
DNMT3A-206ENST00000406659 GJB3O75712 270 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 RASSF9O75901 435 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 BAIAP3O94812 1187 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 HLA-DPA1P20036 260 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 SMAD3P84022 425 aaKnown RBP24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 SLC12A1Q13621 1099 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 PABPC1LQ4VXU2 614 aaKnown RBP24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 KIAA0408Q6ZU52 694 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 TMEM150AQ86TG1 271 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 PACS2Q86VP3 889 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 GPR65Q8IYL9 337 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 SREK1Q8WXA9 508 aaKnown RBP24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 ARMC5Q96C12 935 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 C20orf27Q9GZN8 174 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 NMRAL1Q9HBL8 299 aa24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 ZNF334Q9HCZ1 680 aaPredicted RBP24.89■■□□□ 1.57
DNMT3A-206ENST00000406659 FAM95CA0A1B0GW59 222 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 MROH6A6NGR9 719 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 EPOP01588 193 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 F11P03951 625 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 FGF1P05230 155 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 APOA4P06727 396 aa24.88■■□□□ 1.57
DNMT3A-206ENST00000406659 SPATA31D3P0C874 917 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms