RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 SLFN11Q7Z7L1 901 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 ZC3H7AQ8IWR0 971 aaKnown RBP5.92□□□□□ -1.46
HDAC9-203ENST00000406072 UNC45BQ8IWX7 931 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 HACE1Q8IYU2 909 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 OR8H3Q8N146 312 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 ZNF540Q8NDQ6 660 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 SETD9Q8NE22 299 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 BORCS6Q96GS4 357 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 ELMO2Q96JJ3 720 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 PKP2Q99959 881 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 HDHD2Q9H0R4 259 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 MTRRQ9UBK8 725 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 VTI1BQ9UEU0 232 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 SEPT9Q9UHD8 586 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-203ENST00000406072 CDH9Q9ULB4 789 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 ING4Q9UNL4 249 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 RAD54BQ9Y620 910 aa5.92□□□□□ -1.46
HDAC9-203ENST00000406072 A0A096LPK6 155 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 TMEM221A6NGB7 291 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 A8MV72 311 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 BTBD19C9JJ37 291 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ADM5C9JUS6 153 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 EIF3DO15371 548 aaKnown RBP eCLIP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 LIASO43766 372 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 MED24O75448 989 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 GRAP2O75791 330 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ATG7O95352 703 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 YES1P07947 543 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ZNF806P0C7X5 589 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 HOXD8P13378 290 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ZNF37AP17032 561 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 XRCC1P18887 633 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 TGM2P21980 687 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 YWHABP31946 246 aaKnown RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 SRP54P61011 504 aaKnown RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 PSMC5P62195 406 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 GSTM4Q03013 218 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 LGALS3BPQ08380 585 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 MSLNQ13421 630 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 TOP3AQ13472 1001 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 CBWD6Q4V339 395 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 PABPC1LQ4VXU2 614 aaKnown RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ZNF667Q5HYK9 610 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 CBWD3Q5JTY5 395 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 CBWD5Q5RIA9 395 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 PPP4R4Q6NUP7 873 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 UGT2A3Q6UWM9 527 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 TBC1D21Q8IYX1 336 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 TNS4Q8IZW8 715 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ACTRT2Q8TDY3 377 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 KAT5Q92993 513 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ELMO3Q96BJ8 720 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 POM121Q96HA1 1249 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 FAR2Q96K12 515 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 GLT1D1Q96MS3 346 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 P2RX7Q99572 595 aaKnown RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 GINS4Q9BRT9 223 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 LXNQ9BS40 222 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 CNPY3Q9BT09 278 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 GLIS2Q9BZE0 524 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 CDH19Q9H159 772 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ZNF395Q9H8N7 513 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ITM2CQ9NQX7 267 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 CHST12Q9NRB3 414 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 PIH1D1Q9NWS0 290 aaKnown RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 NDUFAF1Q9Y375 327 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 IGSF9BQ9UPX0 1349 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 M0QYV0 167 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 MAGEB2O15479 319 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ZW10O43264 779 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 SYNCRIPO60506 623 aaKnown RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 CYP7B1O75881 506 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 FAM155BO75949 473 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 FBXO21O94952 628 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 MT-ND1P03886 318 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 TFAP2AP05549 437 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 ABCB1P08183 1280 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 SLC10A3P09131 477 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 TCF3P15923 654 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 RBL1P28749 1068 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 PSMC6P62333 389 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 OLR1P78380 273 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 IL18R1Q13478 541 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 GPR162Q16538 588 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 CLEC16AQ2KHT3 1053 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 FOXB2Q5VYV0 432 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 SNRNP48Q6IEG0 339 aaKnown RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 PRMT9Q6P2P2 845 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 SYCE2Q6PIF2 218 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 PAOXQ6QHF9 649 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 SPESP1Q6UW49 350 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 MAMDC4Q6UXC1 1216 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 KDELC2Q7Z4H8 507 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 TDRPQ86YL5 185 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 CLEC10AQ8IUN9 316 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 C10orf107Q8IVU9 208 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 SLC15A4Q8N697 577 aa5.91□□□□□ -1.46
HDAC9-203ENST00000406072 SKA2Q8WVK7 121 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-203ENST00000406072 TRUB1Q8WWH5 349 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms