RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FMO4P31512 558 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 PPARGP37231 505 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 PTPN9P43378 593 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 BLKP51451 505 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 TERF1P54274 439 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZBED6P86452 979 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 RHAGQ02094 409 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 CYP4A11Q02928 519 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZBTB16Q05516 673 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 CALD1Q05682 793 aaKnown RBP5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 ETFDHQ16134 617 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 GSTA3Q16772 222 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 RAB41Q5JT25 222 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 VWA5B1Q5TIE3 1220 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 NAA16Q6N069 864 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 TMEM65Q6PI78 240 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZNF474Q6S9Z5 364 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 SARM1Q6SZW1 724 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 RFX6Q8HWS3 928 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 ARHGAP12Q8IWW6 846 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 SCAIQ8N9R8 606 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 SMG7Q92540 1137 aaKnown RBP5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 HIC2Q96JB3 615 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 CMTM3Q96MX0 182 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 WDFY2Q96P53 400 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 ABHD14AQ9BUJ0 271 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 HEMGNQ9BXL5 484 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 CADM1Q9BY67 442 aaKnown RBP5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 PDE7BQ9NP56 450 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 MLXIPLQ9NP71 852 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 KIAA1456Q9P272 454 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 MAGED1Q9Y5V3 778 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 A0A1W2PQ09 198 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 OR6C68A6NDL8 312 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 KCNJ18B7U540 433 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 UBE2CO00762 179 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 LIASO43766 372 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 MOSPD3O75425 235 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 CSPG5O95196 566 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 ADAP00813 363 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 ENO1P06733 434 aaKnown RBP5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 TTKP33981 857 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 IDUAP35475 653 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 EIF2DP41214 584 aaKnown RBP5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 VPS41P49754 854 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 PSMC6P62333 389 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 PRAMEP78395 509 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 PSMD6Q15008 389 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 RASA2Q15283 850 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 Q4G0T1 1027 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 ATG9BQ674R7 924 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 TXNDC8Q6A555 127 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 RANBP10Q6VN20 620 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 PIP4P1Q86T03 277 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 TADA2BQ86TJ2 420 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 SCML4Q8N228 414 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 C17orf53Q8N3J3 647 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 PAQR4Q8N4S7 273 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 OR52N4Q8NGI2 321 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 POMGNT1Q8WZA1 660 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 CELF1Q92879 486 aaKnown RBP5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 RPL36ALQ969Q0 106 aaKnown RBP5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZNF347Q96SE7 839 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 SLC29A3Q9BZD2 475 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 SMARCAD1Q9H4L7 1026 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 KAT14Q9H8E8 782 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 POLR1BQ9H9Y6 1135 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 SNTG1Q9NSN8 517 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 ARL15Q9NXU5 204 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 SUCLA2Q9P2R7 463 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 CHORDC1Q9UHD1 332 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 MKLN1Q9UL63 735 aa5.19□□□□□ -1.58
HMGB1P13-201ENST00000406019 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 A0A1W2PRG0 241 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 KCNU1A8MYU2 1149 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 RRHO14718 337 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 CNOT3O75175 753 aaKnown RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 SEC31AO94979 1220 aaKnown RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 SERPINC1P01008 464 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 HLA-DQA2P01906 255 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 HEXAP06865 529 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 DPP6P42658 865 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 SRSF1Q07955 248 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 NIPAL4Q0D2K0 466 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 CSTF3Q12996 717 aaKnown RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZNF268Q14587 947 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 DPCR1Q3MIW9 517 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 GPR139Q6DWJ6 353 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 TMEM154Q6P9G4 183 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 FAM83HQ6ZRV2 1179 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 CHST9Q7L1S5 443 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 PRSS45Q7RTY3 260 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 FAM160B2Q86V87 743 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 GPATCH11Q8N954 259 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 SMARCE1Q969G3 411 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZNF48Q96MX3 618 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 MAK16Q9BXY0 300 aaKnown RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 FRMD8Q9BZ67 464 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 TRIM2Q9C040 744 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms