RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 DPP6P42658 865 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 PSEN2P49810 448 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 RABGGTBP53611 331 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 SLC12A2P55011 1212 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 PKNOX1P55347 436 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 MPP1Q00013 466 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 CTBP1Q13363 440 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 MAP7Q14244 749 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 PTK2BQ14289 1009 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 POU6F1Q14863 301 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 PSMD5Q16401 504 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 TSTD2Q5T7W7 516 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 KIAA0930Q6ICG6 404 aaPredicted RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 DENND5AQ6IQ26 1287 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ESRP1Q6NXG1 681 aaKnown RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 CHSY3Q70JA7 882 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 TAC4Q86UU9 113 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 SATL1Q86VE3 508 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 PELI3Q8N2H9 469 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 CCNYL1Q8N7R7 359 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 SPATA22Q8NHS9 363 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 USP33Q8TEY7 942 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 USP13Q92995 863 aaPredicted RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ASB9Q96DX5 294 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ELMO2Q96JJ3 720 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 PRICKLE1Q96MT3 831 aaPredicted RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ZNF696Q9H7X3 374 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 EML4Q9HC35 981 aaKnown RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 TMEM30AQ9NV96 361 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ETAA1Q9NY74 926 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 GNEQ9Y223 722 aaKnown RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 NUP205Q92621 2012 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 SHROOM3Q8TF72 1996 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 DFFAO00273 331 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 FGF10O15520 208 aaPredicted RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 MT-CYBP00156 380 aaPredicted RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 JUNP05412 331 aaKnown RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ARNTP27540 789 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 HOXC13P31276 330 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ADRA1AP35348 466 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 INHBEP58166 350 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 GALNT1Q10472 559 aaPredicted RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 R3HDM1Q15032 1099 aaKnown RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 FAM83EQ2M2I3 478 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 TIGD7Q6NT04 549 aaPredicted RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 RWDD4Q6NW29 188 aaKnown RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 PLEKHH3Q7Z736 793 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 LILRA2Q8N149 483 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 IPMKQ8NFU5 416 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 DDI1Q8WTU0 396 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ZFP42Q96MM3 310 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 FTHL17Q9BXU8 183 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 CATSPERBQ9H7T0 1116 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ACSS2Q9NR19 701 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 TREX1Q9NSU2 369 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 ARHGEF38Q9NXL2 777 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 UBAP1Q9NZ09 502 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 SUCOQ9UBS9 1254 aaKnown RBP10.85□□□□□ -0.67
CLIP4-204ENST00000404424 LZTS1Q9Y250 596 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 CCDC78A2IDD5 438 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 BTBD19C9JJ37 291 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 MAFKO60675 156 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 THP07101 528 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 SLC1A2P43004 574 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 CREB5Q02930 508 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 SQLEQ14534 574 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 USP41Q3LFD5 358 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 BRMS1LQ5PSV4 323 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 TRIM67Q6ZTA4 783 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 SPATA24Q86W54 205 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 LRRC49Q8IUZ0 686 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 MFSD6LQ8IWD5 586 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 ARHGAP12Q8IWW6 846 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 RIN3Q8TB24 985 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 CALML6Q8TD86 181 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 DQX1Q8TE96 717 aaKnown RBP10.84□□□□□ -0.67
CLIP4-204ENST00000404424 HEXDCQ8WVB3 486 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 TMA16Q96EY4 203 aaKnown RBP10.84□□□□□ -0.67
CLIP4-204ENST00000404424 PKP2Q99959 881 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 FICDQ9BVA6 458 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 POMKQ9H5K3 350 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 SARDHQ9UL12 918 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 PADI4Q9UM07 663 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 NEU3Q9UQ49 428 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 COL4A4P53420 1690 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-204ENST00000404424 IGLV3-25P01717 112 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 TFAP2AP05549 437 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 FAM58BPP0C7Q3 252 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 PGGT1BP53609 377 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 TAS2R39P59534 338 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 PSME3P61289 254 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 TRAP1Q12931 704 aaKnown RBP10.84□□□□□ -0.67
CLIP4-204ENST00000404424 EIF4EBP2Q13542 120 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-204ENST00000404424 TRIM25Q14258 630 aaKnown RBP10.84□□□□□ -0.67
CLIP4-204ENST00000404424 ZNF460Q14592 562 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 ADRM1Q16186 407 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 SLC5A9Q2M3M2 681 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 AGAP9Q5VTM2 703 aa10.84□□□□□ -0.67
CLIP4-204ENST00000404424 CTU1Q7Z7A3 348 aaKnown RBP10.84□□□□□ -0.67
CLIP4-204ENST00000404424 TMEM102Q8N9M5 508 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms