RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 TMCO3Q6UWJ1 677 aa18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 C17orf53Q8N3J3 647 aaPredicted RBP18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 PCDH20Q8N6Y1 951 aaKnown RBP18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 TMIEQ8NEW7 156 aa18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 PIP4K2CQ8TBX8 421 aa18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 PPP1R16AQ96I34 528 aa18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 ACE2Q9BYF1 805 aaPredicted RBP18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 MAGEH1Q9H213 219 aa18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 GAREM1Q9H706 876 aa18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 DDX56Q9NY93 547 aaKnown RBP18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 AMFRQ9UKV5 643 aa18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 PCDHA3Q9Y5H8 950 aa18.19■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3DA0A087WVF3 549 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3IA0A087WXS9 549 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3EA0A087X179 549 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3KA0A087X1G2 549 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 A0A1B0GVT2 93 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3FA6NER0 549 aaPredicted RBP18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3LB9A6J9 549 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 DFFAO00273 331 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 CD160O95971 181 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3HP0C7X1 549 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 CD59P13987 128 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 CHRNA3P32297 505 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 DRD3P35462 400 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 CSNK1EP49674 416 aaKnown RBP18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 SERPINH1P50454 418 aaKnown RBP18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 C21orf59P57076 290 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 ZNF211Q13398 564 aaPredicted RBP18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 HLA-BQ31612 363 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3GQ6DHY5 549 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3CQ6IPX1 549 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 SPOCD1Q6ZMY3 1216 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 PRPF39Q86UA1 669 aaKnown RBP18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 ZNF354CQ86Y25 554 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 TBC1D3Q8IZP1 549 aaPredicted RBP18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 SYCE1Q8N0S2 351 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 LRRN4Q8WUT4 740 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 ISG20Q96AZ6 181 aaKnown RBP18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 RNF157Q96PX1 679 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 PREBQ9HCU5 417 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 DMTF1Q9Y222 760 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 ANKRD6Q9Y2G4 727 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 PCDHB9Q9Y5E1 797 aa18.18■□□□□ 0.5
THUMPD2-202ENST00000403537 ZSCAN5CA6NGD5 496 aaPredicted RBP18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 GIPC1O14908 333 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 VILLO15195 856 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 SMAD6O43541 496 aaKnown RBP18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 PLRG1O43660 514 aaKnown RBP18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 BNIP3LO60238 219 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 TRIM16O95361 564 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 PAPOLAP51003 745 aaKnown RBP18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 DYNLT1P63172 113 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 GBE1Q04446 702 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 SERINC3Q13530 473 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 TAZQ16635 292 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 INAVAQ3KP66 663 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 KAZNQ674X7 775 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 NEK5Q6P3R8 708 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 C22orf39Q6P5X5 142 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 NPNTQ6UXI9 565 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 CCDC50Q8IVM0 306 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 NAXDQ8IW45 347 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 MAP7D3Q8IWC1 876 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 PLPP6Q8IY26 295 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 PLD5Q8N7P1 536 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 OR2A12Q8NGT7 310 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 OR2I1PQ8NGU4 316 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 TM7SF3Q9NS93 570 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 SHROOM3Q8TF72 1996 aa18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 ASCC3Q8N3C0 2202 aaKnown RBP18.17■□□□□ 0.5
THUMPD2-202ENST00000403537 hCG_1818297A0A087WSY0 165 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 CCDC66A2RUB6 948 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 C10orf142B7Z368 130 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 J3KR12 359 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 FLRT2O43155 660 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 LATO43561 262 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 MAGEC1O60732 1142 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 PYGMP11217 842 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 NDST2P52849 883 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 YBEYP58557 167 aaPredicted RBP18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 CNTN1Q12860 1018 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 SLC10A2Q12908 348 aaPredicted RBP18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 PAFAH1B3Q15102 231 aaKnown RBP18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 KIF19Q2TAC6 998 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 PARP15Q460N3 678 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 TRIM69Q86WT6 500 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 RFX6Q8HWS3 928 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 EXD1Q8NHP7 514 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 HES6Q96HZ4 224 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 ORAI3Q9BRQ5 295 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 AASDHPPTQ9NRN7 309 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 IL36AQ9UHA7 158 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 SARDHQ9UL12 918 aa18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.16■□□□□ 0.5
THUMPD2-202ENST00000403537 KPNA3O00505 521 aaPredicted RBP18.15■□□□□ 0.5
THUMPD2-202ENST00000403537 YKT6O15498 198 aa18.15■□□□□ 0.5
THUMPD2-202ENST00000403537 KDELR3O43731 214 aa18.15■□□□□ 0.5
THUMPD2-202ENST00000403537 ZRANB2O95218 330 aaKnown RBP eCLIP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms