RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 LZTS3O60299 673 aaPredicted RBP12.56□□□□□ -0.4
PRAME-204ENST00000403441 SRGAP2O75044 1071 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 PAK4O96013 591 aaPredicted RBP12.56□□□□□ -0.4
PRAME-204ENST00000403441 MMP8P22894 467 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 RBMS1P29558 406 aaKnown RBP12.56□□□□□ -0.4
PRAME-204ENST00000403441 L1CAMP32004 1257 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 ETFBP38117 255 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 CCNHP51946 323 aaPredicted RBP12.56□□□□□ -0.4
PRAME-204ENST00000403441 PDE1CQ14123 709 aaPredicted RBP12.56□□□□□ -0.4
PRAME-204ENST00000403441 CDKN3Q16667 212 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 ISXQ2M1V0 245 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 CARD16Q5EG05 197 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 ARHGAP40Q5TG30 622 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 TRIM72Q6ZMU5 477 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 IRF2BP2Q7Z5L9 587 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 MSANTD4Q8NCY6 345 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 C18orf8Q96DM3 657 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 WBP1Q96G27 269 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 BMFQ96LC9 184 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 TBCBQ99426 244 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 DPH1Q9BZG8 443 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 ZYG11BQ9C0D3 744 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 ZDHHC6Q9H6R6 413 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 CPNE5Q9HCH3 593 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 TMEM59LQ9UK28 342 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 FADS3Q9Y5Q0 445 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 U3KQA8 63 aa12.56□□□□□ -0.4
PRAME-204ENST00000403441 TDRD6O60522 2096 aaKnown RBP12.56□□□□□ -0.4
PRAME-204ENST00000403441 TRPM6Q9BX84 2022 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 RNF103O00237 685 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 RAD51BO15315 384 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 TSPAN6O43657 245 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 JUNDP17535 347 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 RPIAP49247 311 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 GEMIN4P57678 1058 aaKnown RBP12.55□□□□□ -0.4
PRAME-204ENST00000403441 GNA12Q03113 381 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 FGL2Q14314 439 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 NR0B2Q15466 257 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 DEFB133Q30KQ1 61 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 C3orf38Q5JPI3 329 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 TAF3Q5VWG9 929 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 IGF2-ASQ6U949 168 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 RBM44Q6ZP01 1051 aaKnown RBP12.55□□□□□ -0.4
PRAME-204ENST00000403441 PARS2Q7L3T8 475 aaKnown RBP12.55□□□□□ -0.4
PRAME-204ENST00000403441 EFL1Q7Z2Z2 1120 aaKnown RBP12.55□□□□□ -0.4
PRAME-204ENST00000403441 DRC7Q8IY82 874 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 RYBPQ8N488 228 aaPredicted RBP12.55□□□□□ -0.4
PRAME-204ENST00000403441 DENND6BQ8NEG7 585 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 TPCN2Q8NHX9 752 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 LMX1AQ8TE12 382 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 BTN2A2Q8WVV5 523 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 GLMNQ92990 594 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 RAB7BQ96AH8 199 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 ARHGEF26Q96DR7 871 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 CCDC97Q96F63 343 aaPredicted RBP12.55□□□□□ -0.4
PRAME-204ENST00000403441 VCPIP1Q96JH7 1222 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 HAPLN3Q96S86 360 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 PCDHB18PQ96TA0 734 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 IL12RB2Q99665 862 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 EDEM3Q9BZQ6 932 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 ASCL3Q9NQ33 180 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 TMPRSS4Q9NRS4 437 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 SATB2Q9UPW6 733 aa12.55□□□□□ -0.4
PRAME-204ENST00000403441 FCF1Q9Y324 198 aaKnown RBP12.55□□□□□ -0.4
PRAME-204ENST00000403441 CHD5Q8TDI0 1954 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 CXorf51AA0A1B0GTR3 108 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 TCRBV5S1A1TA0A578 114 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 IGLON5A6NGN9 336 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 TPP1O14773 563 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 ZNF821O75541 412 aaPredicted RBP12.54□□□□□ -0.4
PRAME-204ENST00000403441 TCEA3O75764 348 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 ZMPSTE24O75844 475 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 TGM2P21980 687 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 PRKCIP41743 596 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 THOP1P52888 689 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 FANCCQ00597 558 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 VAC14Q08AM6 782 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 POLD3Q15054 466 aaPredicted RBP12.54□□□□□ -0.4
PRAME-204ENST00000403441 FILIP1LQ4L180 1135 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 ARTNQ5T4W7 220 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 NAA35Q5VZE5 725 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 TRNP1Q6NT89 227 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 GUSBP11Q6P575 273 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 PCSK4Q6UW60 755 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 PHF13Q86YI8 300 aaPredicted RBP12.54□□□□□ -0.4
PRAME-204ENST00000403441 NAT6Q93015 286 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 ISG20Q96AZ6 181 aaKnown RBP12.54□□□□□ -0.4
PRAME-204ENST00000403441 ATXN7L3BQ96GX2 97 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 LENG8Q96PV6 779 aaPredicted RBP12.54□□□□□ -0.4
PRAME-204ENST00000403441 C1QTNF7Q9BXJ2 289 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 C1QTNF2Q9BXJ5 285 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 TM6SF2Q9BZW4 377 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 CAAP1Q9H8G2 361 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 AIPL1Q9NZN9 384 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 HECAQ9UBI9 543 aaPredicted RBP12.54□□□□□ -0.4
PRAME-204ENST00000403441 PPARGC1AQ9UBK2 798 aaKnown RBP12.54□□□□□ -0.4
PRAME-204ENST00000403441 SPASTQ9UBP0 616 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 SALL4Q9UJQ4 1053 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 HPCAL4Q9UM19 191 aa12.54□□□□□ -0.4
PRAME-204ENST00000403441 COL6A6A6NMZ7 2263 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms