RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 GDPD4Q6W3E5 623 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 PARS2Q7L3T8 475 aaKnown RBP19.46■□□□□ 0.71
RTN4-207ENST00000402434 DAAM2Q86T65 1068 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 EXOC2Q96KP1 924 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 CINPQ9BW66 212 aaPredicted RBP19.46■□□□□ 0.71
RTN4-207ENST00000402434 DLL3Q9NYJ7 618 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 DKK3Q9UBP4 350 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 SEPT3Q9UH03 358 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 C16orf96A6NNT2 1141 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 CDX4O14627 284 aaPredicted RBP19.45■□□□□ 0.7
RTN4-207ENST00000402434 MUSKO15146 869 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 INSIG1O15503 277 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 AP1G1O43747 822 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 KRT1P04264 644 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 RGRP47804 291 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 RENBPP51606 427 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 GBE1Q04446 702 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 SLC10A2Q12908 348 aaPredicted RBP19.45■□□□□ 0.7
RTN4-207ENST00000402434 RSPO4Q2I0M5 234 aaPredicted RBP19.45■□□□□ 0.7
RTN4-207ENST00000402434 SLC9A4Q6AI14 798 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 KIAA1328Q86T90 577 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 PLD5Q8N7P1 536 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 HCAR2Q8TDS4 363 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 FATE1Q969F0 183 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 RAB7BQ96AH8 199 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 RNF25Q96BH1 459 aaPredicted RBP19.45■□□□□ 0.7
RTN4-207ENST00000402434 RMDN1Q96DB5 314 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 KLHL32Q96NJ5 620 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 TSGA13Q96PP4 275 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 TUBGCP5Q96RT8 1024 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 DESI2Q9BSY9 194 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 EDEM2Q9BV94 578 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 GRPEL1Q9HAV7 217 aa19.45■□□□□ 0.7
RTN4-207ENST00000402434 PCDH15Q96QU1 1955 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 ARHGAP33O14559 1287 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 TNNT1P13805 278 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 ENGP17813 658 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 NUDT1P36639 197 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 CDKN2BP42772 138 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 AFF3P51826 1226 aaKnown RBP19.44■□□□□ 0.7
RTN4-207ENST00000402434 RACK1P63244 317 aaKnown RBP19.44■□□□□ 0.7
RTN4-207ENST00000402434 STPG1Q5TH74 334 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 SRLQ86TD4 932 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 KATNAL2Q8IYT4 538 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 TXLNBQ8N3L3 684 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 ZNF641Q96N77 438 aaPredicted RBP19.44■□□□□ 0.7
RTN4-207ENST00000402434 TM9SF3Q9HD45 589 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 DTLQ9NZJ0 730 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 FADS3Q9Y5Q0 445 aa19.44■□□□□ 0.7
RTN4-207ENST00000402434 DOCK9Q9BZ29 2069 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 SLC30A4O14863 429 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 MX2P20592 715 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 CCNCP24863 283 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 HSPA9P38646 679 aaKnown RBP19.43■□□□□ 0.7
RTN4-207ENST00000402434 KIF5AQ12840 1032 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 HNRNPDQ14103 355 aaKnown RBP19.43■□□□□ 0.7
RTN4-207ENST00000402434 IFI16Q16666 785 aaKnown RBP19.43■□□□□ 0.7
RTN4-207ENST00000402434 MARC1Q5VT66 337 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 MFSD7Q6UXD7 560 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 TEX26Q8N6G2 289 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 LRRC57Q8N9N7 239 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 CCDC112Q8NEF3 446 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 KIAA1524Q8TCG1 905 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 MAK16Q9BXY0 300 aaKnown RBP19.43■□□□□ 0.7
RTN4-207ENST00000402434 ZDHHC5Q9C0B5 715 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 SUV39H2Q9H5I1 410 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 FSCN3Q9NQT6 498 aa19.43■□□□□ 0.7
RTN4-207ENST00000402434 CDV3Q9UKY7 258 aaKnown RBP19.43■□□□□ 0.7
RTN4-207ENST00000402434 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.43■□□□□ 0.7
RTN4-207ENST00000402434 TSPAN11A1L157 253 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 RNGTTO60942 597 aaKnown RBP19.42■□□□□ 0.7
RTN4-207ENST00000402434 ZRANB2O95218 330 aaKnown RBP eCLIP19.42■□□□□ 0.7
RTN4-207ENST00000402434 SYPP08247 313 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 ZFXP17010 805 aaPredicted RBP19.42■□□□□ 0.7
RTN4-207ENST00000402434 CR2P20023 1033 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 MAPK8P45983 427 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 GRIA4P48058 902 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 CSNK1EP49674 416 aaKnown RBP19.42■□□□□ 0.7
RTN4-207ENST00000402434 NAP1L1P55209 391 aaKnown RBP19.42■□□□□ 0.7
RTN4-207ENST00000402434 ODF2Q5BJF6 829 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 PRPF39Q86UA1 669 aaKnown RBP19.42■□□□□ 0.7
RTN4-207ENST00000402434 HORMAD1Q86X24 394 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 RCOR2Q8IZ40 523 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 NSMCE1Q8WV22 266 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 MAML1Q92585 1016 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 HDAC11Q96DB2 347 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 MGME1Q9BQP7 344 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 TMEM9BQ9NQ34 198 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 DMTF1Q9Y222 760 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 ADGRG1Q9Y653 693 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 SHROOM3Q8TF72 1996 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 TRPM6Q9BX84 2022 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 DCHS1Q96JQ0 3298 aa19.42■□□□□ 0.7
RTN4-207ENST00000402434 A0A0U1RQJ8 604 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 A0A1W2PQU0 124 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 APOL1O14791 398 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 AREL1O15033 823 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 MATN3O15232 486 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ARHGAP6O43182 974 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 TSPAN6O43657 245 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms