RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 VANGL2Q9ULK5 521 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 SHROOM3Q8TF72 1996 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 BIRC5O15392 142 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 XKR4Q5GH76 650 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 FSTL4Q6MZW2 842 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 C4orf22Q6V702 233 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 ARCQ7LC44 396 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 PPP1R10Q96QC0 940 aaKnown RBP14.28□□□□□ -0.12
ATG3-202ENST00000402314 TMEM209Q96SK2 561 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 TKTL2Q9H0I9 626 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 EPB41L1Q9H4G0 881 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 TIMMDC1Q9NPL8 285 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 C6orf203Q9P0P8 240 aaPredicted RBP14.28□□□□□ -0.12
ATG3-202ENST00000402314 STK39Q9UEW8 545 aa14.28□□□□□ -0.12
ATG3-202ENST00000402314 TMEM233B4DJY2 109 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 AVPR1AP37288 418 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 PGFP49763 221 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 XIAPP98170 497 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 FAM110CQ1W6H9 321 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 RWDD4Q6NW29 188 aaKnown RBP14.27□□□□□ -0.12
ATG3-202ENST00000402314 TIFABQ6ZNK6 161 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 AHI1Q8N157 1196 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 ARL10Q8N8L6 244 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 SLC2A13Q96QE2 648 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 SUDS3Q9H7L9 328 aaPredicted RBP14.27□□□□□ -0.12
ATG3-202ENST00000402314 MKS1Q9NXB0 559 aa14.27□□□□□ -0.12
ATG3-202ENST00000402314 C17orf102A2RUQ5 167 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 LRIG2O94898 1065 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 POMCP01189 267 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 GNAO1P09471 354 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 BDNFP23560 247 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 BRCC3P46736 316 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 PAFAH1B3Q15102 231 aaKnown RBP14.27□□□□□ -0.13
ATG3-202ENST00000402314 LSM12Q3MHD2 195 aaKnown RBP14.27□□□□□ -0.13
ATG3-202ENST00000402314 GRAMD4Q6IC98 578 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 TOP6BLQ8N6T0 577 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 SCAMP5Q8TAC9 235 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 RNF34Q969K3 372 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 NOL11Q9H8H0 719 aaKnown RBP14.27□□□□□ -0.13
ATG3-202ENST00000402314 WDR41Q9HAD4 459 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 IARS2Q9NSE4 1012 aaKnown RBP14.27□□□□□ -0.13
ATG3-202ENST00000402314 OR12D3Q9UGF7 316 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 ST3GAL5Q9UNP4 418 aa14.27□□□□□ -0.13
ATG3-202ENST00000402314 RBMX2Q9Y388 322 aaKnown RBP14.27□□□□□ -0.13
ATG3-202ENST00000402314 ZCWPW2A0A1B0GU75 182 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 GABRDO14764 452 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 PHGDHO43175 533 aaKnown RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 AP1G1O43747 822 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 GLRA3O75311 464 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 PIM1P11309 404 aaPredicted RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 MLNP12872 115 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 UGT1A6P19224 532 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 NMBRP28336 390 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 SCNN1AP37088 669 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 CBLBQ13191 982 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 ITGA7Q13683 1181 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 CXCL17Q6UXB2 119 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 ZNF786Q8N393 782 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 SMYD1Q8NB12 490 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 PDCD6IPQ8WUM4 868 aaKnown RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 ZNF419Q96HQ0 510 aaPredicted RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 COLEC11Q9BWP8 271 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 ATXN3LQ9H3M9 355 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 CIDEBQ9UHD4 219 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 RAB26Q9ULW5 256 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 FAM149AA5PLN7 773 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 SAC3D1A6NKF1 404 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 CELF2O95319 508 aaKnown RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 MT-CYBP00156 380 aaPredicted RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 GP5P40197 560 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 CRYBB1P53674 252 aaPredicted RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 CTBSQ01459 385 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 ZNF460Q14592 562 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 MGAT5BQ3V5L5 792 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 SPRYD7Q5W111 196 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 BNIPLQ7Z465 357 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 PSTKQ8IV42 348 aaKnown RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 FAM47BQ8NA70 645 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 GTF3C2Q8WUA4 911 aaPredicted RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 SGF29Q96ES7 293 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 PARK7Q99497 189 aaKnown RBP14.26□□□□□ -0.13
ATG3-202ENST00000402314 TMLHEQ9NVH6 421 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 CDY2AQ9Y6F7 541 aa14.26□□□□□ -0.13
ATG3-202ENST00000402314 GLTPD2A6NH11 291 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 APOFQ13790 326 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 ZNF423Q2M1K9 1284 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 TIGD5Q53EQ6 642 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 FSCBQ5H9T9 825 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 SMYD5Q6GMV2 418 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 ELMSAN1Q6PJG2 1045 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 APBA2Q99767 749 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 ZNF696Q9H7X3 374 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 IGSF9Q9P2J2 1179 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 RCOR3Q9P2K3 495 aaPredicted RBP14.25□□□□□ -0.13
ATG3-202ENST00000402314 FBXW11Q9UKB1 542 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 SLC39A10Q9ULF5 831 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 SORCS3Q9UPU3 1222 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 LAMA3Q16787 3333 aa14.25□□□□□ -0.13
ATG3-202ENST00000402314 A0A096LPK6 155 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms