RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 GABRB3P28472 473 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 WNT3AP56704 352 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 PPIDQ08752 370 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 MAP7Q14244 749 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 PAFAH1B3Q15102 231 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 UGP2Q16851 508 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 PCID2Q5JVF3 399 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 IQSEC1Q6DN90 963 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 PKN3Q6P5Z2 889 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 TMEM135Q86UB9 458 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 AFAP1L2Q8N4X5 818 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 HDAC10Q969S8 669 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 EXOC2Q96KP1 924 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 NR1H4Q96RI1 486 aaPredicted RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 FAM105AQ9NUU6 356 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 TRHDEQ9UKU6 1024 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 KCNH4Q9UQ05 1017 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 LZTS1Q9Y250 596 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 BTRCQ9Y297 605 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 AAR2Q9Y312 384 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 CPB1P15086 417 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 CD52P31358 61 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 RANBP1P43487 201 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 ROR2Q01974 943 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 PLOD1Q02809 727 aaPredicted RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 MSLNQ13421 630 aaPredicted RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 TLR1Q15399 786 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 GPR162Q16538 588 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 GPR158Q5T848 1215 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 CWF19L1Q69YN2 538 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 TXNDC5Q8NBS9 432 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 RPL10LQ96L21 214 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 CIB1Q99828 191 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 CASS4Q9NQ75 786 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 FAM50BQ9Y247 325 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 RNF103-CHMP3A0A140T963 221 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 MATN2O00339 956 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 CABYRO75952 493 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 ANXA9O76027 345 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 F9P00740 461 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 SLC35E2BP0CK96 405 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 CRABP2P29373 138 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 PSME3P61289 254 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 TSPY1Q01534 308 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 SLC5A9Q2M3M2 681 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 MTX3Q5HYI7 312 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 AAGABQ6PD74 315 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 LINC00523Q86TU6 105 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 LINC01465Q8N7H1 131 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 MRPL46Q9H2W6 279 aaKnown RBP12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 GLOD4Q9HC38 313 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 DERAQ9Y315 318 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 NCAM2O15394 837 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 MTSS1O43312 755 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 CCNT2O60583 730 aaKnown RBP12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 FBXO21O94952 628 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 FESP07332 822 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 CES1P23141 567 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 LHX1P48742 406 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 PGFP49763 221 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 MAPK10P53779 464 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 IL23RQ5VWK5 629 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 OVOS1Q6IE37 1185 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 ZYG11AQ6WRX3 759 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 HIC2Q96JB3 615 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 C1orf21Q9H246 121 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 CNGB3Q9NQW8 809 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 MKS1Q9NXB0 559 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 BCAP29Q9UHQ4 241 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 SMIM35A0A1B0GVV1 85 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 MAGEB16A2A368 324 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 ARL5CA6NH57 179 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 TIPRLO75663 272 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 SIX3O95343 332 aaPredicted RBP12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 HLA-DQB2P05538 268 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 CKMT2P17540 419 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 KCNA5P22460 613 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 DSC2Q02487 901 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 UBXN11Q5T124 520 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 FBXL19Q6PCT2 694 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 C14orf80Q86SX3 495 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 TOP6BLQ8N6T0 577 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 LRTOMTQ8WZ04 291 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 EIF2B3Q9NR50 452 aaKnown RBP12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 TMLHEQ9NVH6 421 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 GDAP2Q9NXN4 497 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 RCOR3Q9P2K3 495 aaPredicted RBP12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 ADAM28Q9UKQ2 775 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 PSMD13Q9UNM6 376 aa12.79□□□□□ -0.36
PPP4R1-202ENST00000400555 SF3B1O75533 1304 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■■■■■ 51.7
PPP4R1-202ENST00000400555 LRRC14BA6NHZ5 514 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 TOMM70O94826 608 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 STAU1O95793 577 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 MYL4P12829 197 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 MTTPP55157 894 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 CAPRIN1Q14444 709 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 TAF1CQ15572 869 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 GSTA3Q16772 222 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 SLC39A12Q504Y0 691 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms