RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 PRKAG1P54619 331 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 CREMQ03060 361 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 MARK2Q7KZI7 788 aaKnown RBP18.67■□□□□ 0.58
USP25-204ENST00000400183 UXS1Q8NBZ7 420 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 ZNF398Q8TD17 642 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 EBNA1BP2Q99848 306 aaKnown RBP18.67■□□□□ 0.58
USP25-204ENST00000400183 MRPL57Q9BQC6 102 aaKnown RBP18.67■□□□□ 0.58
USP25-204ENST00000400183 FTHL17Q9BXU8 183 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 IGFLR1Q9H665 355 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 SHBGP04278 402 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 IDH2P48735 452 aaKnown RBP18.67■□□□□ 0.58
USP25-204ENST00000400183 RAB10P61026 200 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 PTSQ03393 145 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 RHBGQ9H310 441 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 FANCEQ9HB96 536 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 SLC12A4Q9UP95 1085 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 CHKBQ9Y259 395 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 hCG_1818297A0A087WSY0 165 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 OPLAHO14841 1288 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 ERBB2P04626 1255 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 CDC42P60953 191 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 SWT1Q5T5J6 900 aaKnown RBP18.67■□□□□ 0.58
USP25-204ENST00000400183 TTC7BQ86TV6 843 aa18.67■□□□□ 0.58
USP25-204ENST00000400183 AKAP7Q9P0M2 348 aaPredicted RBP18.67■□□□□ 0.58
USP25-204ENST00000400183 IRF6O14896 467 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 ALOX12P18054 663 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 RPL3P39023 403 aaKnown RBP18.66■□□□□ 0.58
USP25-204ENST00000400183 TNFSF9P41273 254 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 RTP1P59025 263 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 ITGB3BPQ13352 177 aaPredicted RBP18.66■□□□□ 0.58
USP25-204ENST00000400183 ZNHIT3Q15649 155 aaPredicted RBP18.66■□□□□ 0.58
USP25-204ENST00000400183 MAPK11Q15759 364 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 ADAMTSL2Q86TH1 951 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 DENND1CQ8IV53 801 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 MREGQ8N565 214 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 ART4Q93070 314 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.66■□□□□ 0.58
USP25-204ENST00000400183 ITSN1Q15811 1721 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 VWDEQ8N2E2 1590 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 EFCAB10A6NFE3 127 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 C1QTNF3-AMACRE9PGA6 284 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 BST1Q10588 318 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 LYPLAL1Q5VWZ2 237 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 MBOAT7Q96N66 472 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 ACE2Q9BYF1 805 aaPredicted RBP18.66■□□□□ 0.58
USP25-204ENST00000400183 RNPEPL1Q9HAU8 725 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 ERCC2P18074 760 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 GPR1P46091 355 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 TOP3AQ13472 1001 aaPredicted RBP18.66■□□□□ 0.58
USP25-204ENST00000400183 ULK2Q8IYT8 1036 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 HJURPQ8NCD3 748 aaPredicted RBP18.66■□□□□ 0.58
USP25-204ENST00000400183 OR5B17Q8NGF7 314 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 FAM192AQ9GZU8 254 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 GSTK1Q9Y2Q3 226 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 OR6B1O95007 311 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 IL6P05231 212 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 GOT1P17174 413 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 GRIA3P42263 894 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 PDK4Q16654 411 aa18.66■□□□□ 0.58
USP25-204ENST00000400183 PTCD3Q96EY7 689 aaKnown RBP18.66■□□□□ 0.58
USP25-204ENST00000400183 EPHB6O15197 1021 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 ASNA1O43681 348 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 MAGEC1O60732 1142 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 FTH1P02794 183 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 MYBL2P10244 700 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 RNF43Q68DV7 783 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 RAET1GQ6H3X3 334 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 LRRC52Q8N7C0 313 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 MAGEE2Q8TD90 523 aaPredicted RBP18.65■□□□□ 0.58
USP25-204ENST00000400183 COL26A1Q96A83 441 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 HDAC3O15379 428 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 TBL1XO60907 577 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 UNC5CO95185 931 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 COX4I1P13073 169 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 TTKP33981 857 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 MATKP42679 507 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 PSME3P61289 254 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 NRF1Q16656 503 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 BHLHB9Q6PI77 547 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 KIAA0408Q6ZU52 694 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 DET1Q7L5Y6 550 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 MSL3Q8N5Y2 521 aaKnown RBP18.65■□□□□ 0.58
USP25-204ENST00000400183 RDH11Q8TC12 318 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 SPATA5L1Q9BVQ7 753 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 ACSS3Q9H6R3 686 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 SPAG4Q9NPE6 437 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 RPRD1BQ9NQG5 326 aaKnown RBP18.65■□□□□ 0.58
USP25-204ENST00000400183 FBXL21Q9UKT6 434 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 RAP2CQ9Y3L5 183 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 SRRM3A6NNA2 597 aaPredicted RBP18.65■□□□□ 0.58
USP25-204ENST00000400183 SLC25A3Q00325 362 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 TAF5Q15542 800 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 CES5AQ6NT32 575 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 CRELD2Q6UXH1 353 aaPredicted RBP18.65■□□□□ 0.58
USP25-204ENST00000400183 EIF3MQ7L2H7 374 aaKnown RBP18.65■□□□□ 0.58
USP25-204ENST00000400183 NET1Q7Z628 596 aaPredicted RBP18.65■□□□□ 0.58
USP25-204ENST00000400183 FBXW8Q8N3Y1 598 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 KCTD4Q8WVF5 259 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 NDNQ99608 321 aa18.65■□□□□ 0.58
USP25-204ENST00000400183 SPATA31C2B4DYI2 1134 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms