RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 RNASE11Q8TAA1 199 aaKnown RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TWNKQ96RR1 684 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 FSD1LQ9BXM9 530 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 MTFR1LQ9H019 292 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TP63Q9H3D4 680 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 COG5Q9UP83 839 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 CFL2Q9Y281 166 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 GSTK1Q9Y2Q3 226 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 C2orf71A6NGG8 1288 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 AIREO43918 545 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 NR3C2P08235 984 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 PDGFRAP16234 1089 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 APOFQ13790 326 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 E2F2Q14209 437 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 KYAT1Q16773 422 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 EPC2Q52LR7 807 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ZC3H7AQ8IWR0 971 aaKnown RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 SLC15A3Q8IY34 581 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 TXNDC15Q96J42 360 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ERMAPQ96PL5 475 aaPredicted RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 PSD2Q9BQI7 771 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 HDHD2Q9H0R4 259 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 OLA1Q9NTK5 396 aaKnown RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ABCG2Q9UNQ0 655 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 MLNP12872 115 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 PTGER2P43116 358 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 PSMC5P62195 406 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 DGCR6Q14129 220 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF404Q494X3 552 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ATP13A5Q4VNC0 1218 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 FAM160B1Q5W0V3 765 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 REP15Q6BDI9 236 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 TIGD7Q6NT04 549 aaPredicted RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 GALNT7Q86SF2 657 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 SCML4Q8N228 414 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 EXT2Q93063 718 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ATXN7L3BQ96GX2 97 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 MECRQ9BV79 373 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 CDH7Q9ULB5 785 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 A0A0G2JPF8 293 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 HNRNPCL3B7ZW38 293 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 TRIM3O75382 744 aaPredicted RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 MED24O75448 989 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 GDF11O95390 407 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 HPRP00739 348 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 PRKCBP05771 671 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 HNRNPCL4P0DMR1 293 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 TPSB2P20231 275 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 WARSP23381 471 aaKnown RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 IL4RP24394 825 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 DNAJB1P25685 340 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 GSTM2P28161 218 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 AKT1P31749 480 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 TRIM23P36406 574 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 SLC15A1P46059 708 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ALDH3B2P48448 385 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 FMO1Q01740 532 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 TPSAB1Q15661 275 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 CYP2A13Q16696 494 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 CNSTQ6PJW8 725 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 DNAAF5Q86Y56 855 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 PLCZ1Q86YW0 608 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 RYBPQ8N488 228 aaPredicted RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 DNAJA4Q8WW22 397 aaPredicted RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 SHC3Q92529 594 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 AURKBQ96GD4 344 aaPredicted RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 SH2D3AQ9BRG2 576 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 HERC2P3Q9BVR0 1158 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 RIBC2Q9H4K1 309 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 VRTNQ9H8Y1 702 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 RBAKQ9NYW8 714 aaPredicted RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 NR2E1Q9Y466 385 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 SIGLEC16A6NMB1 481 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ICMTO60725 284 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ARHGEF15O94989 841 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 SERPINA1P01009 418 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 INHBCP55103 352 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 CAMK1Q14012 370 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 VPS72Q15906 364 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 PYDC2Q56P42 97 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 PNCKQ6P2M8 343 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 OR8H3Q8N146 312 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 EFCAB3Q8N7B9 438 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 SETD6Q8TBK2 473 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 CDK5RAP1Q96SZ6 601 aaKnown RBP10.06□□□□□ -0.8
PTPRM-203ENST00000400060 CCDC167Q9P0B6 97 aa10.06□□□□□ -0.8
PTPRM-203ENST00000400060 ASTN1O14525 1302 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 EFCAB9A8MZ26 197 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 F5H6K3 240 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 UBXN8O00124 270 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 LYPLA1O75608 230 aaPredicted RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 MBL2P11226 248 aaPredicted RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 KLRC2P26717 231 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 DNASE1L3Q13609 305 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 MPP2Q14168 576 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 STARD3Q14849 445 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ACOX1Q15067 660 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 C2CD6Q53TS8 623 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 TPRG1LQ5T0D9 272 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms