RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 HYKKA2RU49 373 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 IFNGR2P38484 337 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 EIF2B2P49770 351 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 CCT8P50990 548 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 ZC3H14Q6PJT7 736 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 OTOP3Q7RTS5 596 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 EID3Q8N140 333 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 PRMT1Q99873 361 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 OSBPL8Q9BZF1 889 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 ZNF214Q9UL59 606 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 LRRC10BA6NIK2 292 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 TRAPPC6AO75865 159 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 FTH1P02794 183 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 PTPN9P43378 593 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 SARSP49591 514 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 DDR2Q16832 855 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 TMEM86AQ8N2M4 240 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 IL22RA1Q8N6P7 574 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 PROX1Q92786 737 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 PHF20Q9BVI0 1012 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 KIAA1683Q9H0B3 1180 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 BLOC1S6Q9UL45 172 aa11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-216ENST00000399638 SERPINB8P50452 374 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 WSCD1Q658N2 575 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 GDF6Q6KF10 455 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 SPATA21Q7Z572 469 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 SYT12Q8IV01 421 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 UTP15Q8TED0 518 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ATOH1Q92858 354 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 KLF6Q99612 283 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 RUSC1Q9BVN2 902 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ARHGAP28Q9P2N2 729 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 CLEC4AQ9UMR7 237 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 TNFRSF21O75509 655 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 MICAL2O94851 1124 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 KCNA5P22460 613 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 IL12BP29460 328 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 PGM1P36871 562 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 AP1S1P61966 158 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 AP5B1Q2VPB7 878 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 GJB7Q6PEY0 223 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 USP49Q70CQ1 688 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 MILR1Q7Z6M3 343 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 NOD2Q9HC29 1040 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 PLK2Q9NYY3 685 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 TBC1D14Q9P2M4 693 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 POU2F3Q9UKI9 436 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 GRID1Q9ULK0 1009 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 H3BN98 237 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 NOS1APO75052 506 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 PDK2Q15119 407 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 C2CD6Q53TS8 623 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 TCEAL6Q6IPX3 200 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ZNF366Q8N895 744 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 CRTAC1Q9NQ79 661 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 PLAGL2Q9UPG8 496 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 FPGTO14772 594 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 FFAR2O15552 330 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 SNRPAP09012 282 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 CPA2P48052 419 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 SLC7A2P52569 658 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 PRMT2P55345 433 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ILF3Q12906 894 aaKnown RBP eCLIP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 CHI3L2Q15782 390 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 KCTD21Q4G0X4 260 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 SLC9A4Q6AI14 798 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 CASP12Q6UXS9 341 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 METTL3Q86U44 580 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 C4orf33Q8N1A6 199 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ZFP28Q8NHY6 868 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ZNF285Q96NJ3 590 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 TMEM120AQ9BXJ8 343 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 TOR4AQ9NXH8 423 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 EHD3Q9NZN3 535 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 KIAA1522Q9P206 1035 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 PSMC3IPQ9P2W1 217 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 CA14Q9ULX7 337 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 BARX2Q9UMQ3 279 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ANGPT4Q9Y264 503 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ANKRD26Q9UPS8 1709 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 LIN7AO14910 233 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 TRIM24O15164 1050 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 BPNT1O95861 308 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 IL6P05231 212 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 LYNP07948 512 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 YBX3P16989 372 aaKnown RBP eCLIP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 USF2Q15853 346 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 STRA8Q7Z7C7 330 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 FAM228AQ86W67 206 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 GPR20Q99678 358 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 TRIM51Q9BSJ1 452 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 COPS4Q9BT78 406 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 TSPAN16Q9UKR8 245 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 SLC12A4Q9UP95 1085 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 USP15Q9Y4E8 981 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ERAL1O75616 437 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ALOX12P18054 663 aa11.06□□□□□ -0.64
CACNA1C-216ENST00000399638 ITIH2P19823 946 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms