RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 APTXQ7Z2E3 356 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 ARPINQ7Z6K5 226 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 COMMD2Q86X83 199 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 SLC9A9Q8IVB4 645 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 GPC2Q8N158 579 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 SVOPQ8N4V2 548 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 EIF1ADQ8N9N8 165 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 TERB1Q8NA31 727 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 CENPIQ92674 756 aaPredicted RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 HDAC10Q969S8 669 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 KREMEN1Q96MU8 473 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 MRPS26Q9BYN8 205 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 C2orf71A6NGG8 1288 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 ANKDD1BA6NHY2 528 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 POLR2EP19388 210 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 GTF2E2P29084 291 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 BRCC3P46736 316 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 STX4Q12846 297 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 NAB1Q13506 487 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 PCDH12Q9NPG4 1184 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 SNX15Q9NRS6 342 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 HDAC3O15379 428 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 FGF10O15520 208 aaPredicted RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 ULK1O75385 1050 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 LRATO95237 230 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 KCNH1O95259 989 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 POLR2LP62875 67 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 SPDYCQ5MJ68 293 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 USP45Q70EL2 814 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 CAMK1DQ8IU85 385 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 ASZ1Q8WWH4 475 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 NDRG1Q92597 394 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 CLIP3Q96DZ5 547 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 NXF3Q9H4D5 531 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 ZFYVE1Q9HBF4 777 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 TCRBV7S2A1N4TA0A589 114 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 EIF2S1P05198 315 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 LINC00032P0C843 101 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 CD52P31358 61 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 ITGADQ13349 1161 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 FAM187BQ17R55 369 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 ZSWIM7Q19AV6 140 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 MREGQ8N565 214 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 ZFRQ96KR1 1074 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 NUDT17P0C025 328 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 EPORP19235 508 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 GSTT1P30711 240 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 RAB10P61026 200 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 USP46P62068 366 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 COX10Q12887 443 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 TRAF3Q13114 568 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 HECTD3Q5T447 861 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 CERCAMQ5T4B2 595 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 ZC3H7AQ8IWR0 971 aaKnown RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 ASB2Q96Q27 587 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 MRPL45Q9BRJ2 306 aaKnown RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 ZYG11BQ9C0D3 744 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 LRMDAQ9H2I8 198 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 WDR55Q9H6Y2 383 aaPredicted RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 VPS4BO75351 444 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 FAM155BO75949 473 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 TSPAN19P0C672 248 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 ARF4P18085 180 aaPredicted RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 CYP4F2P78329 520 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 CYP4F3Q08477 520 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 EIF2B5Q13144 721 aaKnown RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 HSDL1Q3SXM5 330 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 PTPN20Q4JDL3 420 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 C8orf59Q8N0T1 100 aaPredicted RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 SUSD6Q92537 303 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 USP7Q93009 1102 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 P2RY11Q96G91 374 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 MRPL9Q9BYD2 267 aaKnown RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 OSBPL6Q9BZF3 934 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 HMX1Q9NP08 348 aaPredicted RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 UXTQ9UBK9 157 aaPredicted RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 SLC9A8Q9Y2E8 581 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 POLR1DQ9Y2S0 133 aa13.27□□□□□ -0.28
ITSN1-208ENST00000399349 TNPO3Q9Y5L0 923 aaKnown RBP13.27□□□□□ -0.28
ITSN1-208ENST00000399349 MANSC4A6NHS7 340 aaPredicted RBP13.27□□□□□ -0.29
ITSN1-208ENST00000399349 PRR5-ARHGAP8B1AHC4 643 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 HPCAL1P37235 193 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 DRG2P55039 364 aaKnown RBP13.27□□□□□ -0.29
ITSN1-208ENST00000399349 ARHGAP8P85298 464 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 NRG1Q02297 640 aaPredicted RBP13.27□□□□□ -0.29
ITSN1-208ENST00000399349 CYP2A13Q16696 494 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 STK40Q8N2I9 435 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 NKAPQ8N5F7 415 aaKnown RBP13.27□□□□□ -0.29
ITSN1-208ENST00000399349 CAMKK1Q8N5S9 505 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 ZNF670Q9BS34 389 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 NUAK2Q9H093 628 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 EPB41L4BQ9H329 900 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 PCDHB9Q9Y5E1 797 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 BCLAF3A2AJT9 711 aaKnown RBP13.27□□□□□ -0.29
ITSN1-208ENST00000399349 CYP2A6P11509 494 aaPredicted RBP13.27□□□□□ -0.29
ITSN1-208ENST00000399349 ST13P50502 369 aaKnown RBP13.27□□□□□ -0.29
ITSN1-208ENST00000399349 FKBP1CQ5VVH2 108 aa13.27□□□□□ -0.29
ITSN1-208ENST00000399349 ADHFE1Q8IWW8 467 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms